RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM229AB2RXF0 380 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 SAPCD1Q5SSQ6 148 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 H7C1H1 209 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 ERGP11308 486 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 SAMD13Q5VXD3 122 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 SDHCQ99643 169 aaPredicted RBP12□□□□□ -0.49
COL4A3-202ENST00000396578 DOPEY2Q9Y3R5 2298 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 PSMB11A5LHX3 300 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 ZG16O60844 167 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 PMS2CLQ68D20 193 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 LINC00305Q7Z4B0 112 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 H3BRM9 83 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 CA7P43166 264 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 DERL1Q9BUN8 251 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 EEF1AKMT3Q96AZ1 226 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 MBD1Q9UIS9 605 aaPredicted RBP12□□□□□ -0.49
COL4A3-202ENST00000396578 INTS1Q8N201 2190 aaKnown RBP12□□□□□ -0.49
COL4A3-202ENST00000396578 ODAMA1E959 279 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 LIMS1P48059 325 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 TEX29Q8N6K0 151 aa12□□□□□ -0.49
COL4A3-202ENST00000396578 LDLRAD4O15165 306 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 NDUFA2O43678 99 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 P2RY6Q15077 328 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 TTC9CQ8N5M4 171 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 SFXN3Q9BWM7 321 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 LRP5O75197 1615 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 A0A1W2PP11 408 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 GZMMP51124 257 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 CLDND2Q8NHS1 167 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 PSMG3Q9BT73 122 aaPredicted RBP11.99□□□□□ -0.49
COL4A3-202ENST00000396578 CCL4P13236 92 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 GPX4P36969 197 aaPredicted RBP11.99□□□□□ -0.49
COL4A3-202ENST00000396578 CEP250Q9BV73 2442 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 THY1P04216 161 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM50AO95807 157 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 IL11P20809 199 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 PTGDSP41222 190 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 DMRTA2Q96SC8 542 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 NPDC1Q9NQX5 325 aaPredicted RBP11.99□□□□□ -0.49
COL4A3-202ENST00000396578 PHF3Q92576 2039 aaKnown RBP11.99□□□□□ -0.49
COL4A3-202ENST00000396578 NRTNQ99748 197 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 NABP2Q9BQ15 211 aa11.99□□□□□ -0.49
COL4A3-202ENST00000396578 IGKV1D-16P01601 117 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 RBMY1BA6NDE4 496 aaKnown RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 RBMY1EA6NEQ0 496 aaKnown RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 RBMY1DP0C7P1 496 aaKnown RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 RBMY1CP0DJD4 496 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 NPPCP23582 126 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 GCHFRP30047 84 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 SNAI3Q3KNW1 292 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 PSMG4Q5JS54 123 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 LHX8Q68G74 356 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 ZNF324BQ6AW86 544 aaPredicted RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 LILRA6Q6PI73 481 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 TNFRSF18Q9Y5U5 241 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 FOXI3A8MTJ6 420 aaPredicted RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 CEACAM4O75871 244 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 C2orf68Q2NKX9 166 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 C9orf50Q5SZB4 431 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 PKIBQ9C010 78 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 SPCS1Q9Y6A9 102 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 ADAMTSL3P82987 1691 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 C1QAP02745 245 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 TYMSP04818 313 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 IL36BQ9NZH7 164 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 PAPPAQ13219 1627 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 NGFRP08138 427 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 TMEM30BQ3MIR4 351 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 GSN-AS1Q9NRJ2 163 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 DTX4Q9Y2E6 619 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 XIRP1Q702N8 1843 aaKnown RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
COL4A3-202ENST00000396578 SSBP3Q9BWW4 388 aaPredicted RBP11.98□□□□□ -0.49
COL4A3-202ENST00000396578 SFTPCP11686 197 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 DLL3Q9NYJ7 618 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 DOCK10Q96BY6 2186 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 PCSK4Q6UW60 755 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 ATP5IP56385 69 aaPredicted RBP11.97□□□□□ -0.49
COL4A3-202ENST00000396578 HOXA5P20719 270 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 TBR1Q16650 682 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 DNM1P46Q6ZS02 220 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 SPTBN1Q01082 2364 aaKnown RBP11.97□□□□□ -0.49
COL4A3-202ENST00000396578 TRAV8-2A0A0B4J237 113 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 APOMO95445 188 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 APOHP02749 345 aaPredicted RBP11.97□□□□□ -0.49
COL4A3-202ENST00000396578 FHITP49789 147 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 ITLN1Q8WWA0 313 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 OR5AN1Q8NGI8 311 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 FMC1Q96HJ9 113 aa11.97□□□□□ -0.49
COL4A3-202ENST00000396578 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.97□□□□□ -0.49
COL4A3-202ENST00000396578 POLEQ07864 2286 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms