RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SLC31A2O15432 143 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 LOXL3P58215 753 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 RPP30P78346 268 aaKnown RBP12.99□□□□□ -0.33
HOXA3-202ENST00000396352 MIC13Q5XKP0 118 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 HEYLQ9NQ87 328 aaPredicted RBP12.99□□□□□ -0.33
HOXA3-202ENST00000396352 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 NCOR1O75376 2440 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 IGLV1-44P01699 117 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 RNF224P0DH78 156 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 TMEM204Q9BSN7 226 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 IFI27L2Q9H2X8 130 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 ELOVL5Q9NYP7 299 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
HOXA3-202ENST00000396352 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 CACNA1GO43497 2377 aa12.99□□□□□ -0.33
HOXA3-202ENST00000396352 IGHV2OR16-5A0A0B4J2B6 119 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 YPEL1O60688 119 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 CR1LQ2VPA4 569 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 ZNF718Q3SXZ3 478 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 C1orf229Q6ZS94 237 aaPredicted RBP12.98□□□□□ -0.33
HOXA3-202ENST00000396352 ABHD12Q8N2K0 398 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SDSLQ96GA7 329 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 WFIKKN1Q96NZ8 548 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 YPEL2Q96QA6 119 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 NDUFAF3Q9BU61 184 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 TUBG2Q9NRH3 451 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 LSM4Q9Y4Z0 139 aaKnown RBP12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SCO2A0A1W2PP80 73 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 CXorf1O96002 111 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SNRPCP09234 159 aaKnown RBP12.98□□□□□ -0.33
HOXA3-202ENST00000396352 CCKARP32238 428 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SSTP61278 116 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 PLA2G2CQ5R387 149 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SGMS2Q8NHU3 365 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 MISP3Q96FF7 219 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 DUSP13Q9UII6 198 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 ZFHX4Q86UP3 3567 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 IGHV1-18A0A0C4DH31 117 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 A0A1B0GUS0 222 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 IGHV3-13P01766 116 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 IGHV3-7P01780 117 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 OR4A8P0C604 315 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 GCH1P30793 250 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 TAS2R60P59551 318 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 UTF1Q5T230 341 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 DMRTC2Q8IXT2 367 aaPredicted RBP12.98□□□□□ -0.33
HOXA3-202ENST00000396352 TXNDC17Q9BRA2 123 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 TMEM140Q9NV12 185 aa12.98□□□□□ -0.33
HOXA3-202ENST00000396352 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
HOXA3-202ENST00000396352 SRRM5B3KS81 715 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 AQP7O14520 342 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 NDUFB7P17568 137 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 MRPL41Q8IXM3 137 aaKnown RBP12.97□□□□□ -0.33
HOXA3-202ENST00000396352 FAM216AQ8WUB2 273 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 DDB2Q92466 427 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 COL8A2P25067 703 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 OR2Z1Q8NG97 314 aa12.97□□□□□ -0.33
HOXA3-202ENST00000396352 ASPMQ8IZT6 3477 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 F2RL2O00254 374 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 ERVK-16P61578 105 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 MSMPQ1L6U9 139 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 BTF3L4Q96K17 158 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 TCF19Q9Y242 345 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 SP9P0CG40 484 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 TIMP3P35625 211 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
HOXA3-202ENST00000396352 ARSJQ5FYB0 599 aaPredicted RBP12.96□□□□□ -0.33
HOXA3-202ENST00000396352 TCF23Q7RTU1 214 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 BEND2Q8NDZ0 799 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 SSMEM1Q8WWF3 244 aa12.96□□□□□ -0.33
HOXA3-202ENST00000396352 MDFIC2A0A1B0GVS7 189 aa12.96□□□□□ -0.34
HOXA3-202ENST00000396352 NUPR1O60356 82 aa12.96□□□□□ -0.34
HOXA3-202ENST00000396352 OCC1Q8TAD7 63 aa12.96□□□□□ -0.34
HOXA3-202ENST00000396352 IGHV3OR15-7A0A075B7D8 119 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 MGST3O14880 152 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 IL6RP08887 468 aaPredicted RBP12.95□□□□□ -0.34
HOXA3-202ENST00000396352 SPRNQ5BIV9 151 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 TEX38Q6PEX7 206 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 GCSAMQ8N6F7 178 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 S1PR3Q99500 378 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 CHODLQ9H9P2 273 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
HOXA3-202ENST00000396352 ADMP35318 185 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 IQCJQ1A5X6 159 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 SPATA31B1PQ5VZV4 182 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 ZNRF1Q8ND25 227 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 HEATR1Q9H583 2144 aaKnown RBP12.95□□□□□ -0.34
HOXA3-202ENST00000396352 DSCAML1Q8TD84 2053 aa12.95□□□□□ -0.34
HOXA3-202ENST00000396352 C15orf61A6NNL5 157 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 HNF1AP20823 631 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
HOXA3-202ENST00000396352 EFNB3Q15768 340 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 NPVFQ9HCQ7 196 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 CFAP47Q6ZTR5 3102 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 K7EN84 100 aa12.94□□□□□ -0.34
HOXA3-202ENST00000396352 GCHFRP30047 84 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms