RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TNFSF18Q9UNG2 199 aa16.41■□□□□ 0.22
VCPKMT-202ENST00000395860 ITPR2Q14571 2701 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 TET2Q6N021 2002 aaPredicted RBP16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 E5RGE8 158 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 UPK2O00526 184 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 KBTBD11O94819 623 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 SNRNP70P08621 437 aaKnown RBP16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 IL6RP08887 468 aaPredicted RBP16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 UBE2KP61086 200 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 TNFRSF9Q07011 255 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 HES1Q14469 280 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 LGALSLQ3ZCW2 172 aaPredicted RBP16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 INO80EQ8NBZ0 244 aaPredicted RBP16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 MFFQ9GZY8 342 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 HSPB7Q9UBY9 170 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 HSPB11Q9Y547 144 aa16.4■□□□□ 0.22
VCPKMT-202ENST00000395860 C15orf61A6NNL5 157 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 L7N2F9 121 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 SYNGR2O43760 224 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 SLC25A17O43808 307 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 CHST1O43916 411 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 MED6O75586 246 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 MOSP00540 346 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 CD24P25063 80 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 BRS3P32247 399 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 NUP62P37198 522 aaPredicted RBP16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 VAMP2P63027 116 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 LAMTOR1Q6IAA8 161 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 OR2T10Q8NGZ9 312 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 OR4A5Q8NH83 315 aa16.39■□□□□ 0.21
VCPKMT-202ENST00000395860 KCNAB3O43448 404 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 IFNA17P01571 189 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 CXCL2P19875 107 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 CNTFRP26992 372 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 AP2S1P53680 142 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 HNF4GQ14541 408 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 ZNF429Q86V71 674 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 RBKSQ9H477 322 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 PRNDQ9UKY0 176 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 A0A0U1RQK1 487 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 AARDQ4LEZ3 155 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 TEX45Q8NA69 505 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 TMEM167AQ8TBQ9 72 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 EAF1Q96JC9 268 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 CACFD1Q9UGQ2 172 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 NUP50Q9UKX7 468 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 FOXA2Q9Y261 457 aaPredicted RBP16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 FAM96BQ9Y3D0 163 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 BOLA1Q9Y3E2 137 aa16.38■□□□□ 0.21
VCPKMT-202ENST00000395860 PSG5Q15238 335 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 ACOT7LQ6ZUV0 252 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 RAB40CQ96S21 281 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 PLSCR3Q9NRY6 295 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 TMEM14BQ9NUH8 114 aa16.37■□□□□ 0.21
VCPKMT-202ENST00000395860 CSMD1Q96PZ7 3565 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 CEBPZOSA8MTT3 80 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 FAM106CPP0CH98 169 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 IAPPP10997 89 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 P2RY1P47900 373 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 SPCS3P61009 180 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 MMDQ15546 238 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 OR52E5Q8NH55 327 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 NANPQ8TBE9 248 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 FKBP11Q9NYL4 201 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 METTL1Q9UBP6 276 aaKnown RBP16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 OR51B2Q9Y5P1 312 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 RNF222A6NCQ9 220 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 OR2F2O95006 317 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 SPDEFO95238 335 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 BPIFB3P59826 476 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 RPL8P62917 257 aaKnown RBP16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 OR2F1Q13607 317 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 EBI3Q14213 229 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 ZNF345Q14585 488 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 SPINK9Q5DT21 86 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 ZC4H2Q9NQZ6 224 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 TPSG1Q9NRR2 321 aa16.36■□□□□ 0.21
VCPKMT-202ENST00000395860 NBR2O15453 112 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 TMEM11P17152 192 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 RPL12P30050 165 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 F2RL1P55085 397 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 RPL23AP62750 156 aaKnown RBP16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 FAM120AOSQ5T036 256 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 THNSL2Q86YJ6 484 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 ZDHHC16Q969W1 377 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 AQP10Q96PS8 301 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 MEGF9Q9H1U4 602 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 KIAA1456Q9P272 454 aa16.35■□□□□ 0.21
VCPKMT-202ENST00000395860 A0A0D9SG52 128 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 MSGN1A6NI15 193 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 GPR137BO60478 399 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 CRYGBP07316 175 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 FGF2P09038 288 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 FBP1P09467 338 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 HKR1P10072 659 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 MYOD1P15172 320 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 CAV2P51636 162 aa16.34■□□□□ 0.21
VCPKMT-202ENST00000395860 PAX9P55771 341 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms