RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PRDM13Q9H4Q3 707 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 A0A1B0GV72 72 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 A1L4Q6 167 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 LYPD3O95274 346 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 TMEM208Q9BTX3 173 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 ZNF256Q9Y2P7 627 aaPredicted RBP14.66□□□□□ -0.06
SIN3A-203ENST00000394949 COX6CP09669 75 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 EGR1P18146 543 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 WDR31Q8NA23 367 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 TMUB1Q9BVT8 246 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 CALYQ9NYX4 217 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
SIN3A-203ENST00000394949 LAMTOR2Q9Y2Q5 125 aa14.66□□□□□ -0.06
SIN3A-203ENST00000394949 TBX6O95947 436 aaPredicted RBP14.65□□□□□ -0.06
SIN3A-203ENST00000394949 CELA2AP08217 269 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 TNFSF10P50591 281 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 ZNF841Q6ZN19 808 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 GFI1Q99684 422 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 RND2P52198 227 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 HIST1H4GQ99525 98 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 GDF15Q99988 308 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 FOXD3Q9UJU5 478 aaPredicted RBP14.65□□□□□ -0.06
SIN3A-203ENST00000394949 PLXNB2O15031 1838 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 SSTR5P35346 364 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 AICDAQ9GZX7 198 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 UBTD1Q9HAC8 227 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 TMEM106BQ9NUM4 274 aa14.65□□□□□ -0.06
SIN3A-203ENST00000394949 OTX1P32242 354 aaPredicted RBP14.65□□□□□ -0.07
SIN3A-203ENST00000394949 LURAP1LQ8IV03 231 aa14.65□□□□□ -0.07
SIN3A-203ENST00000394949 HIST3H2BBQ8N257 126 aa14.65□□□□□ -0.07
SIN3A-203ENST00000394949 CLDN16Q9Y5I7 305 aa14.65□□□□□ -0.07
SIN3A-203ENST00000394949 LOC107984156A0A0G2JMH3 177 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 hCG_38984A0A1B0GV85 526 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 MGPP08493 103 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 IL6RP08887 468 aaPredicted RBP14.64□□□□□ -0.07
SIN3A-203ENST00000394949 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 ARL17AQ8IVW1 177 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 OR1N2Q8NGR9 330 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 HIST1H2BLQ99880 126 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 ANKRD36A6QL64 1941 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 MMDQ15546 238 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 FAM89BQ8N5H3 189 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 SMIM13P0DJ93 91 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 ARF6P62330 175 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 ABHD12Q8N2K0 398 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 OR5P3Q8WZ94 311 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 AKAP6Q13023 2319 aa14.64□□□□□ -0.07
SIN3A-203ENST00000394949 COL11A1P12107 1806 aaPredicted RBP14.64□□□□□ -0.07
SIN3A-203ENST00000394949 GPR6P46095 362 aaPredicted RBP14.63□□□□□ -0.07
SIN3A-203ENST00000394949 SHANK3Q9BYB0 1731 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 NKX2-8O15522 239 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 MUC15Q8N387 334 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 LRTM2Q8N967 370 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 ZNF502Q8TBZ5 544 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 A0A1W2PR77 199 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 SRSF12Q8WXF0 261 aaKnown RBP14.63□□□□□ -0.07
SIN3A-203ENST00000394949 WNT10AQ9GZT5 417 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 ZNF324BQ6AW86 544 aaPredicted RBP14.63□□□□□ -0.07
SIN3A-203ENST00000394949 IDI2-AS1Q9NZ38 188 aa14.63□□□□□ -0.07
SIN3A-203ENST00000394949 DOCK3Q8IZD9 2030 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 RBPMS2Q6ZRY4 209 aaKnown RBP14.62□□□□□ -0.07
SIN3A-203ENST00000394949 C14orf144Q96I85 54 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 ALKBH7Q9BT30 221 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-203ENST00000394949 CHODLQ9H9P2 273 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 REG1BP48304 166 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 CYTL1Q9NRR1 136 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 EPOPA6NHQ4 379 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 PLAUP00749 431 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 CCL8P80075 99 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 LINC00470Q9BZP3 86 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 TMEM78Q5T7P6 136 aa14.62□□□□□ -0.07
SIN3A-203ENST00000394949 IGKV1D-43A0A0B4J1Z2 117 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 A0A1W2PQM1 296 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 NUDT3O95989 172 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 IMMP2LQ96T52 175 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 CCL1P22362 96 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 SSBP3Q9BWW4 388 aaPredicted RBP14.61□□□□□ -0.07
SIN3A-203ENST00000394949 SERF1AO75920 110 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 NRN1LQ496H8 165 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 ZNF826PQ6ZT77 177 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 OR4A5Q8NH83 315 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 SLC17A3O00476 420 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 CTSBP07858 339 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 PSG9Q00887 426 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 SRSF4Q08170 494 aaKnown RBP14.61□□□□□ -0.07
SIN3A-203ENST00000394949 TBR1Q16650 682 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 NRN1Q9NPD7 142 aa14.61□□□□□ -0.07
SIN3A-203ENST00000394949 INTS1Q8N201 2190 aaKnown RBP14.61□□□□□ -0.07
SIN3A-203ENST00000394949 SYNGR3O43761 229 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 ID3Q02535 119 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 TRAV30A0A087WSZ9 112 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 IGHV3-21A0A0B4J1V1 117 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 RRHO14718 337 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 BEND2Q8NDZ0 799 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 SRXN1Q9BYN0 137 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 RTN4RQ9BZR6 473 aa14.6□□□□□ -0.07
SIN3A-203ENST00000394949 RIF1Q5UIP0 2472 aaKnown RBP14.6□□□□□ -0.07
SIN3A-203ENST00000394949 SCO2A0A1W2PP80 73 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms