RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CLDND2Q8NHS1 167 aa12.32□□□□□ -0.44
GPC3-202ENST00000394299 CIB3Q96Q77 187 aaPredicted RBP12.32□□□□□ -0.44
GPC3-202ENST00000394299 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
GPC3-202ENST00000394299 HINT2Q9BX68 163 aa12.32□□□□□ -0.44
GPC3-202ENST00000394299 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
GPC3-202ENST00000394299 GNG13Q9P2W3 67 aa12.32□□□□□ -0.44
GPC3-202ENST00000394299 MEF2CQ06413 473 aaPredicted RBP12.31□□□□□ -0.44
GPC3-202ENST00000394299 EFNB3Q15768 340 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 HEPN1Q6WQI6 88 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.31□□□□□ -0.44
GPC3-202ENST00000394299 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 MRPL20Q9BYC9 149 aaKnown RBP12.31□□□□□ -0.44
GPC3-202ENST00000394299 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 TCF19Q9Y242 345 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
GPC3-202ENST00000394299 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 AWAT1Q58HT5 328 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 AVPI1Q5T686 147 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 OR13D1Q8NGV5 346 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 M0R036 132 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 SCAF4O95104 1147 aaKnown RBP12.3□□□□□ -0.44
GPC3-202ENST00000394299 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 KIR2DS2P43631 304 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 GNB2P62879 340 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 HFEQ30201 348 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 TMPRSS5Q9H3S3 457 aa12.3□□□□□ -0.44
GPC3-202ENST00000394299 PUS1Q9Y606 427 aaKnown RBP eCLIP12.3□□□□□ -0.44
GPC3-202ENST00000394299 SRP19P09132 144 aaKnown RBP12.29□□□□□ -0.44
GPC3-202ENST00000394299 SERF2P84101 59 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 ZNF672Q499Z4 452 aaPredicted RBP12.29□□□□□ -0.44
GPC3-202ENST00000394299 TMEM41BQ5BJD5 291 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 CYB561D1Q8N8Q1 229 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 FAM216AQ8WUB2 273 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
GPC3-202ENST00000394299 HIVEP3Q5T1R4 2406 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 A0A1B0GW64 132 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 SMCO3A2RU48 225 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 C15orf61A6NNL5 157 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 ARG1P05089 322 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 HOXA1P49639 335 aaPredicted RBP12.29□□□□□ -0.44
GPC3-202ENST00000394299 GCSAMLQ5JQS6 135 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 LINC00518Q8N0U6 118 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 CLCC1Q96S66 551 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 NPCDR1Q9BY65 106 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 SLC25A22Q9H936 323 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 CSMD1Q96PZ7 3565 aa12.29□□□□□ -0.44
GPC3-202ENST00000394299 C7orf77A4D0Y5 90 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 FAM90A9PA6NNJ1 464 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 H7C2Y5 167 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 ATP6V1FQ16864 119 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 DPPA3Q6W0C5 159 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 C11orf42Q8N5U0 333 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 Q8N7P7 452 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 PARD6GQ9BYG4 376 aaPredicted RBP12.28□□□□□ -0.44
GPC3-202ENST00000394299 HIPK2Q9H2X6 1198 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 DLX6P56179 175 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 B2MP61769 119 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 FFAR4Q5NUL3 377 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 ZNF833PQ6ZTB9 187 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 MBD3L1Q8WWY6 194 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 ISOC2Q96AB3 205 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 TMEM14BQ9NUH8 114 aa12.28□□□□□ -0.44
GPC3-202ENST00000394299 MAP1LC3B2A6NCE7 125 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 MDKP21741 143 aaPredicted RBP12.27□□□□□ -0.44
GPC3-202ENST00000394299 CD1BP29016 333 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 VWC2Q2TAL6 325 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 ZNF506Q5JVG8 444 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 CENPVQ7Z7K6 275 aaPredicted RBP12.27□□□□□ -0.44
GPC3-202ENST00000394299 ZNF429Q86V71 674 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 OR10X1Q8NGY0 326 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 OR52E5Q8NH55 327 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 ADTRPQ96IZ2 230 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 MAP1LC3BQ9GZQ8 125 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 SLC39A9Q9NUM3 307 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 KAAG1Q9UBP8 84 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 OR51B2Q9Y5P1 312 aa12.27□□□□□ -0.44
GPC3-202ENST00000394299 TRAV1-1A0A0B4J248 108 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 J3QR06 171 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 DLL1O00548 723 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 HBE1P02100 147 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 IFNA4P05014 189 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.45
GPC3-202ENST00000394299 UNQ6494/PRO21346Q6UXR6 183 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 OR10G4Q8NGN3 311 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 OR10G9Q8NGN4 311 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 OR10G7Q8NGN6 311 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 GATAD1Q8WUU5 269 aa12.27□□□□□ -0.45
GPC3-202ENST00000394299 ARHGAP32A7KAX9 2087 aa12.26□□□□□ -0.45
GPC3-202ENST00000394299 LOC102723971A0A1B0GUV8 181 aa12.26□□□□□ -0.45
GPC3-202ENST00000394299 PRSS46E5RG02 174 aa12.26□□□□□ -0.45
GPC3-202ENST00000394299 HRASP01112 189 aa12.26□□□□□ -0.45
GPC3-202ENST00000394299 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
GPC3-202ENST00000394299 TMEM155Q4W5P6 130 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms