RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PUSL1Q8N0Z8 303 aaKnown RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM74BQ9NUR3 256 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM238C9JI98 176 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 SEC11AP67812 179 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 GATAD1Q8WUU5 269 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 VWC2LB2RUY7 222 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 ZNF205O95201 554 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 RBM11P57052 281 aaKnown RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 PLXNA1Q9UIW2 1896 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 ORMDL2Q53FV1 153 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 NR2C2APQ86WQ0 139 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 RCC1P18754 421 aaPredicted RBP12.73□□□□□ -0.37
CCDC50-201ENST00000392455 JMJD8Q96S16 334 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 WDR54Q9H977 334 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
CCDC50-201ENST00000392455 IGKV3D-11A0A0A0MRZ8 115 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 IGKV3-11P04433 115 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 PNLIPP16233 465 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 HMGCLL1Q8TB92 370 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
CCDC50-201ENST00000392455 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 CST9LQ9H4G1 147 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 PEMTQ9UBM1 199 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 PQLC2LA1A4F0 135 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 AGFG2O95081 481 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 IGKV3D-15A0A087WSY6 115 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 IGKV3-15P01624 115 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
CCDC50-201ENST00000392455 TSPO2Q5TGU0 170 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 YBX2Q9Y2T7 364 aaKnown RBP12.72□□□□□ -0.37
CCDC50-201ENST00000392455 FOXH1O75593 365 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 FGF12P61328 243 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 LHX9Q9NQ69 397 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 ZNF257Q9Y2Q1 563 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 COX11Q9Y6N1 276 aa12.72□□□□□ -0.37
CCDC50-201ENST00000392455 COL9A1P20849 921 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 DMKNQ6E0U4 476 aaPredicted RBP12.71□□□□□ -0.37
CCDC50-201ENST00000392455 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 APELAP0DMC3 54 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 PARP14Q460N5 1801 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 VSTM2LQ96N03 204 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 ADAMTSL1Q8N6G6 1762 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 RBMY1FQ15415 496 aaKnown RBP12.71□□□□□ -0.37
CCDC50-201ENST00000392455 CEACAM21Q3KPI0 293 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 ASCL4Q6XD76 172 aa12.71□□□□□ -0.37
CCDC50-201ENST00000392455 LIPT2A6NK58 231 aa12.71□□□□□ -0.38
CCDC50-201ENST00000392455 DUTP33316 252 aaKnown RBP12.71□□□□□ -0.38
CCDC50-201ENST00000392455 SMPXQ9UHP9 88 aa12.71□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.38
CCDC50-201ENST00000392455 ZNF729A6NN14 1252 aaPredicted RBP12.71□□□□□ -0.38
CCDC50-201ENST00000392455 MAGEA5P43359 124 aa12.71□□□□□ -0.38
CCDC50-201ENST00000392455 GVQW1Q8N7I0 195 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 CT62P0C5K7 136 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 TFF2Q03403 129 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 UNQ5815/PRO19632Q6UWF5 114 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 PLAUP00749 431 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 MUC1P15941 1255 aaPredicted RBP12.7□□□□□ -0.38
CCDC50-201ENST00000392455 LYZL2Q7Z4W2 148 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 ASCL2Q99929 193 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 KLK15Q9H2R5 256 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 FOXD3Q9UJU5 478 aaPredicted RBP12.7□□□□□ -0.38
CCDC50-201ENST00000392455 NPIPB11E5RHQ5 1161 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 IL6RP08887 468 aaPredicted RBP12.7□□□□□ -0.38
CCDC50-201ENST00000392455 CISD3P0C7P0 127 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 GOLT1AQ6ZVE7 132 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 JPT2Q9H910 190 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 FRRS1LQ9P0K9 344 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 TOMM40O96008 361 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 M0R2P5 195 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
CCDC50-201ENST00000392455 IGKV3OR2-268A0A0C4DH90 116 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 SP9P0CG40 484 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 TDGF1P3P51864 188 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 TMEM91Q6ZNR0 172 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 H3BMM0 161 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 EIF3GO75821 320 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC50-201ENST00000392455 PMVKQ15126 192 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 ADAD2Q8NCV1 583 aaKnown RBP12.69□□□□□ -0.38
CCDC50-201ENST00000392455 SMIM8Q96KF7 97 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 IFITM2Q01629 132 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 CD5P06127 495 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 COL10A1Q03692 680 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 ST6GALNAC2Q9UJ37 374 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 CACNA1GO43497 2377 aa12.69□□□□□ -0.38
CCDC50-201ENST00000392455 EML6Q6ZMW3 1958 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms