RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 H0YIZ8 118 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 RND2P52198 227 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 BTF3L4Q96K17 158 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 RNF222A6NCQ9 220 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 FAM222BQ8WU58 562 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 TMEM37Q8WXS4 190 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 TMEM186Q96B77 213 aa13.82□□□□□ -0.2
SNX9-201ENST00000392185 MMP9P14780 707 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 EGR1P18146 543 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 TUBD1Q9UJT1 453 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 CLDN34H7C241 214 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 LY6EQ16553 131 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 SMIM15Q7Z3B0 74 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 CLRN3Q8NCR9 226 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 VAX2Q9UIW0 290 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 IGKV3-15P01624 115 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 FAM157CP0CG43 387 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 NAT1P18440 290 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 GNLYP22749 145 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 SUMO1P63165 101 aaKnown RBP13.81□□□□□ -0.2
SNX9-201ENST00000392185 SERF2P84101 59 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 OR5I1Q13606 314 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 NDFIP1Q9BT67 221 aa13.81□□□□□ -0.2
SNX9-201ENST00000392185 C7orf77A4D0Y5 90 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 RAMP3O60896 148 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 GNG4P50150 75 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 ARL16Q0P5N6 197 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 BSXQ3C1V8 233 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 G3V3Q6 166 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 CRYBA1P05813 215 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 CD24P25063 80 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 C1QTNF9BB2RNN3 333 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 FAM90A26D6RGX4 464 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 C1QTNF9P0C862 333 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 LINC00869P0C866 280 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 ZNF146Q15072 292 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 CYB561D1Q8N8Q1 229 aa13.8□□□□□ -0.2
SNX9-201ENST00000392185 MRPL20Q9BYC9 149 aaKnown RBP13.8□□□□□ -0.2
SNX9-201ENST00000392185 LAMA3Q16787 3333 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 H0Y8G0 127 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 FBP1P09467 338 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 NHLRC3Q5JS37 347 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 CCL19Q99731 98 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 FBXL15Q9H469 300 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
SNX9-201ENST00000392185 SUPT4H1P63272 117 aaKnown RBP13.79□□□□□ -0.2
SNX9-201ENST00000392185 C10orf113Q5VZT2 155 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 COLCA1Q6ZS62 124 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 BIVMQ86UB2 503 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 LHFPL1Q86WI0 220 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 PDPNQ86YL7 162 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 M0QZ24 198 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 NTF3P20783 257 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 USF1P22415 310 aaPredicted RBP13.79□□□□□ -0.2
SNX9-201ENST00000392185 PAX5Q02548 391 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 RNF126Q9BV68 326 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 TNFSF13O75888 250 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 TCL1AP56279 114 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 RND3P61587 244 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 MORN2Q502X0 79 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 Q8WTZ3 238 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 LINC00312Q9Y6C7 94 aa13.79□□□□□ -0.2
SNX9-201ENST00000392185 CHEK1O14757 476 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 RAB4AP20338 218 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 ZNF439Q8NDP4 499 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 RAB24Q969Q5 203 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 EAF1Q96JC9 268 aaPredicted RBP13.78□□□□□ -0.2
SNX9-201ENST00000392185 TMEM167BQ9NRX6 74 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 CRIM1Q9NZV1 1036 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 GOSR1O95249 250 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 NAPSAO96009 420 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 PDLIM4P50479 330 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 MBNL2Q5VZF2 373 aaKnown RBP13.78□□□□□ -0.2
SNX9-201ENST00000392185 ZNF880Q6PDB4 577 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 CD177Q8N6Q3 437 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 RPRMQ9NS64 109 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 C5orf42Q9H799 3197 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 SERTM2A0A1B0GWG4 89 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 IGFL3Q6UXB1 125 aa13.78□□□□□ -0.2
SNX9-201ENST00000392185 SSBP3Q9BWW4 388 aaPredicted RBP13.78□□□□□ -0.2
SNX9-201ENST00000392185 SAA2-SAA4A0A096LPE2 208 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 H3BQ15 152 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 WISP2O76076 250 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 FAM106CPP0CH98 169 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 SAA2P0DJI9 122 aaPredicted RBP13.77□□□□□ -0.2
SNX9-201ENST00000392185 OR4A47Q6IF82 309 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 SMIM8Q96KF7 97 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 PIMREGQ9BSJ6 248 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 CLEC5AQ9NY25 188 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 S4R3C0 116 aa13.77□□□□□ -0.2
SNX9-201ENST00000392185 LINC00205P59089 165 aa13.77□□□□□ -0.21
SNX9-201ENST00000392185 ZNF324BQ6AW86 544 aaPredicted RBP13.77□□□□□ -0.21
SNX9-201ENST00000392185 NPIPB3Q92617 1050 aa13.77□□□□□ -0.21
SNX9-201ENST00000392185 C1orf147Q96MC9 270 aaPredicted RBP13.77□□□□□ -0.21
SNX9-201ENST00000392185 ALPK3Q96L96 1907 aa13.77□□□□□ -0.21
SNX9-201ENST00000392185 DBX1A6NMT0 343 aa13.77□□□□□ -0.21
SNX9-201ENST00000392185 CLN5O75503 358 aa13.77□□□□□ -0.21
SNX9-201ENST00000392185 ZNF672Q499Z4 452 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms