RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 APOBEC3DQ96AK3 386 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 GPR146Q96CH1 333 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 REEP6Q96HR9 211 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TMEM101Q96IK0 257 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGF2BP2-AS1Q96M15 143 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 YPEL4Q96NS1 127 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ERMAPQ96PL5 475 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TSPAN32Q96QS1 320 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 OR2M2Q96R28 347 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 GPER1Q99527 375 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TSC22D3Q99576 134 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 OPRPNQ99935 248 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 PAXXQ9BUH6 204 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TBL1XR1Q9BZK7 514 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ULBP3Q9BZM4 244 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TMEM222Q9H0R3 208 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 GTSF1LQ9H1H1 148 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 IFI27L2Q9H2X8 130 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 BOLA2Q9H3K6 86 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ZSCAN16Q9H4T2 348 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 NOX3Q9HBY0 568 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ZNF331Q9NQX6 463 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 C8orf17Q9NRJ1 99 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TMEM38BQ9NVV0 291 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 MRPL27Q9P0M9 148 aaKnown RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TAC3Q9UHF0 121 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ZNF230Q9UIE0 474 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TBX21Q9UL17 535 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 PYCARDQ9ULZ3 195 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 NEU3Q9UQ49 428 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 MYH2Q9UKX2 1941 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 ZFHX2Q9C0A1 2572 aaPredicted RBP1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 SCN10AQ9Y5Y9 1956 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 SSC5DA1L4H1 1573 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 LRRK1Q38SD2 2015 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 MYO9AB2RTY4 2548 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 NCOR2Q9Y618 2525 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 TEX15Q9BXT5 2789 aa1.08□□□□□ -2.24
RNU1-78P-201ENST00000391248 USP9XQ93008 2570 aaPredicted RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 NLRC5Q86WI3 1866 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 EEA1Q15075 1411 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 ERBINQ96RT1 1412 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 RRBP1Q9P2E9 1410 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 TECTAO75443 2155 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PRRC2BQ5JSZ5 2229 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PIEZO2Q9H5I5 2752 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 UBR2Q8IWV8 1755 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 ABCC6O95255 1503 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGLV1-50A0A075B6I6 118 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGKV2D-30A0A075B6S6 120 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 TRAV8-1A0A0A6YYK1 113 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGHV5-51A0A0C4DH38 117 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGKV1-12A0A0C4DH73 117 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 A0A0J9YY10 115 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 A0A1B0GX78 115 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 TMEM72A0PK05 275 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGSF23A1L1A6 192 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 VPS37CA5D8V6 355 aaPredicted RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 LINC00862A6NCI5 91 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 OR4C45A6NMZ5 311 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 KNCNA6PVL3 124 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CD300LBA8K4G0 201 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 B8ZZF3 427 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PRSS44E7EML9 344 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 INS-IGF2F8WCM5 200 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 H3BSA7 217 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 K7EPK0 472 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 LST1O00453 97 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PIRO00625 290 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 COX7A2LO14548 114 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 RGS5O15539 181 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 TCF21O43680 179 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PI15O43692 258 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 SRSF10O75494 262 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 SCO1O75880 301 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CCNKO75909 580 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGKV1D-12P01611 117 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 IGLV3-25P01717 112 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 GYPCP04921 128 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CECR9P0C854 216 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CD34P28906 385 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 ERP29P30040 261 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 DDTP30046 118 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 OR10J1P30954 320 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CA5AP35218 305 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 PPP1CCP36873 323 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 GABRA4P48169 554 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 ZNF83P51522 516 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 HMGA2P52926 109 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 HSPE1P61604 102 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 AP1S1P61966 158 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 GNG5P63218 68 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 ATP5G2Q06055 141 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 BSPH1Q075Z2 132 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 DAZ2Q13117 558 aaKnown RBP1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 BAMBIQ13145 260 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 TMEM241Q24JQ0 296 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 SMIM21Q3B7S5 101 aa1.07□□□□□ -2.24
RNU1-78P-201ENST00000391248 CCDC58Q4VC31 144 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms