RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IP6K3Q96PC2 410 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 OR2A7Q96R45 310 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 METTL26Q96S19 204 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 TP53RKQ96S44 253 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 LYSMD1Q96S90 227 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 KLF6Q99612 283 aaPredicted RBP1.25□□□□□ -2.21
TRAV40-201ENST00000390467 C20orf27Q9GZN8 174 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 SLIRPQ9GZT3 109 aaKnown RBP1.25□□□□□ -2.21
TRAV40-201ENST00000390467 CHST6Q9GZX3 395 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 OR52D1Q9H346 318 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 DAZ1Q9NQZ3 744 aaKnown RBP1.25□□□□□ -2.21
TRAV40-201ENST00000390467 UBQLN4Q9NRR5 601 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM100Q9NV29 134 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 MTFP1Q9UDX5 166 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 NAT8BQ9UHF3 227 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 SHPKQ9UHJ6 478 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF230Q9UIE0 474 aaPredicted RBP1.25□□□□□ -2.21
TRAV40-201ENST00000390467 TNFSF18Q9UNG2 199 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 SSR3Q9UNL2 185 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 LAMTOR2Q9Y2Q5 125 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 WDR97A6NE52 1622 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 SCN10AQ9Y5Y9 1956 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 MYO15BQ96JP2 1530 aa1.25□□□□□ -2.21
TRAV40-201ENST00000390467 UHRF1BP1LA0JNW5 1464 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 RAPGEF2Q9Y4G8 1499 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PTPRKQ15262 1439 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TNS3Q68CZ2 1445 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ABCC12Q96J65 1359 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 KIF15Q9NS87 1388 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 MED23Q9ULK4 1368 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 IGHV3-74A0A0B4J1X5 117 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 A0A1B0GW64 132 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 DUXBA0A1W2PPF3 345 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C5orf49A4QMS7 147 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C5orf63A6NC05 138 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LINC00862A6NCI5 91 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 GMNCA6NCL1 334 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 FAM183AA6NL82 134 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 FABP5P3A8MUU1 101 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C9JAW5 83 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LGALS9O00182 355 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 UPK1AO00322 258 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 FFAR1O14842 300 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CCL25O15444 150 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 NDUFS5O43920 106 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OR7C2O60412 319 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 DHRS3O75911 302 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 NDUFC2O95298 119 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF682O95780 498 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HBZP02008 142 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 OPN1SWP03999 348 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 IL4P05112 153 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ERGP11308 486 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CPMP14384 443 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HIST1H1BP16401 226 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CTLA4P16410 223 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LGALS3P17931 250 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CSRP1P21291 193 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 FGF7P21781 194 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CCL1P22362 96 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CD70P32970 193 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 GABRA2P47869 451 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CXCL12P48061 93 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 POLR2HP52434 150 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CTBP2P56545 445 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 DAD1P61803 113 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HBA1P69905 142 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HLA-DRB3P79483 266 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 INCA1Q0VD86 236 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LAMTOR4Q0VGL1 99 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 IL15RAQ13261 267 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PNOCQ13519 176 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 HTR4Q13639 388 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ENDOGQ14249 297 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PAFAH1B3Q15102 231 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 EBPQ15125 230 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SSX1Q16384 188 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ZNF181Q2M3W8 571 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C12orf74Q32Q52 190 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 Q499Y3 187 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CCSMST1Q4G0I0 132 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CENPWQ5EE01 88 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 PABPC1L2AQ5JQF8 200 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM69Q5SWH9 247 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 IBA57Q5T440 356 aaKnown RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 TMEM236Q5W0B7 351 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 KDM4DQ6B0I6 523 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 LCN8Q6JVE9 175 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CEMP1Q6PRD7 247 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 ARL9Q6T311 187 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 CLEC19AQ6UXS0 136 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 FBXW12Q6X9E4 464 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SCGB1D4Q6XE38 83 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 Q6ZRU5 148 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 SNX29P2Q8IUI4 249 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C8orf59Q8N0T1 100 aaPredicted RBP1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C4orf33Q8N1A6 199 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 EXOC3-AS1Q8N2X6 119 aa1.24□□□□□ -2.21
TRAV40-201ENST00000390467 C12orf45Q8N5I9 185 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms