RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 UCP2P55851 309 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 FLYWCH2Q96CP2 140 aaKnown RBP11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 TCF19Q9Y242 345 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 SMPD2O60906 423 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 GTF2H5Q6ZYL4 71 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 STPG3Q8N7X2 389 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 LRRK1Q38SD2 2015 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 CGAP01215 116 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 RBP4P02753 201 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 COL8A1P27658 744 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 ERASQ7Z444 233 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 ANAPC10Q9UM13 185 aa11.11□□□□□ -0.63
TRAPPC9-201ENST00000389328 CELA3AP09093 270 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 CSN1S1P47710 185 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 GABRA6Q16445 453 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 Q6ZRM9 215 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 GBGT1Q8N5D6 347 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 DERL1Q9BUN8 251 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 IL36BQ9NZH7 164 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 A8MWP6 167 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 HIST1H1EP10412 219 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 REG1BP48304 166 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 MAP1LC3CQ9BXW4 147 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 MRPL37Q9BZE1 423 aaKnown RBP11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 PRNDQ9UKY0 176 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 IGHV3-21A0A0B4J1V1 117 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 ZNF324BQ6AW86 544 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
TRAPPC9-201ENST00000389328 THSD7BQ9C0I4 1608 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 TMEM210A6NLX4 147 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ISLRO14498 428 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ARL16Q0P5N6 197 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 DHRS13Q6UX07 377 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ADTRPQ96IZ2 230 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ZPBPQ9BS86 351 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 DCTN5Q9BTE1 182 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 SAP30LQ9HAJ7 183 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 LNP1A1A4G5 178 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 PMCHL1Q16048 86 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ST6GALNAC6Q969X2 333 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 FAM122AQ96E09 287 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 HARBI1Q96MB7 349 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 RBM14Q96PK6 669 aaKnown RBP11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 MS4A5Q9H3V2 200 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 FER1L5A0AVI2 2057 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 A0A1B0GUS0 222 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 WFDC8Q8IUA0 241 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 OCC1Q8TAD7 63 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ARRDC1-AS1Q9H2J1 176 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 DEPPQ9NTK1 212 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 COL4A3Q01955 1670 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 DOPEY2Q9Y3R5 2298 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 TEX50A0A1B0GTY4 177 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 IGKV1-5P01602 117 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 SOX8P57073 446 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 BEND2Q8NDZ0 799 aa11.09□□□□□ -0.63
TRAPPC9-201ENST00000389328 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 B4E171 279 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 TMPRSS2O15393 492 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 AMY1AP04745 511 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 IL6RP08887 468 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 TSPAN7P41732 249 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 LYZP61626 148 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 SIGLEC12Q96PQ1 595 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 NABP2Q9BQ15 211 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 TFF1P04155 84 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 LINC00869P0C866 280 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 MPV17P39210 176 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 FOXA3P55318 350 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 PRDM13Q9H4Q3 707 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 PTGDSP41222 190 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 RND2P52198 227 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 FOXG1P55316 489 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 KLF3P57682 345 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 MMDQ15546 238 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 MAFAQ8NHW3 353 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 TMEM45BQ96B21 275 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 ABCA1O95477 2261 aa11.08□□□□□ -0.64
TRAPPC9-201ENST00000389328 COX5BP10606 129 aa11.07□□□□□ -0.64
TRAPPC9-201ENST00000389328 TNFAIP6P98066 277 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC9-201ENST00000389328 DCAF10Q5QP82 559 aa11.07□□□□□ -0.64
TRAPPC9-201ENST00000389328 C1orf194Q5T5A4 169 aa11.07□□□□□ -0.64
TRAPPC9-201ENST00000389328 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms