RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 GFRA3O60609 400 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 CD40P25942 277 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 THBS3P49746 956 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.44
SCFD2-201ENST00000388940 NUP37Q8NFH4 326 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 CORO2AQ92828 525 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 ADTRPQ96IZ2 230 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 HEYLQ9NQ87 328 aaPredicted RBP12.33□□□□□ -0.44
SCFD2-201ENST00000388940 CADP27708 2225 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 TNFSF4P23510 183 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 PLA2G5P39877 138 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 OPRK1P41145 380 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 CDX1P47902 265 aaPredicted RBP12.33□□□□□ -0.44
SCFD2-201ENST00000388940 FAM27E3Q08E93 113 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 FAM201AQ5SY85 155 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 GAFA1Q96PS6 74 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 DOK5Q9P104 306 aa12.33□□□□□ -0.44
SCFD2-201ENST00000388940 K7EM74 188 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 RRHO14718 337 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 RAB4AP20338 218 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 RPL23P62829 140 aaKnown RBP12.32□□□□□ -0.44
SCFD2-201ENST00000388940 TCF15Q12870 199 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 BSXQ3C1V8 233 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 ZNF788Q6ZQV5 615 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 VKORC1L1Q8N0U8 176 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 ZNF439Q8NDP4 499 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 OR4F5Q8NH21 305 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 OR4F4Q96R69 305 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 PARLQ9H300 379 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 TCF19Q9Y242 345 aa12.32□□□□□ -0.44
SCFD2-201ENST00000388940 RAI1Q7Z5J4 1906 aaPredicted RBP12.32□□□□□ -0.44
SCFD2-201ENST00000388940 SAA2-SAA4A0A096LPE2 208 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TRAV3A0A0B4J244 114 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 C15orf61A6NNL5 157 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BKO60814 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 IGHV3-7P01780 117 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BJP06899 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 SAA2P0DJI9 122 aaPredicted RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BOP23527 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BBP33778 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BDP58876 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BCP62807 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST2H2BEQ16778 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TREML4Q6UXN2 200 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 C22orf34Q6ZV56 151 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 GATAD1Q8WUU5 269 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BHQ93079 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 NEIL1Q96FI4 390 aaPredicted RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BNQ99877 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 HIST1H2BMQ99879 126 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 IDI2-AS1Q9NZ38 188 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 FOXA2Q9Y261 457 aaPredicted RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 PAGE4O60829 102 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TRGC2P03986 189 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 NDUFA6P56556 154 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 ADIRFQ15847 76 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 NCMAPQ5T1S8 102 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 UTF1Q5T230 341 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TCF23Q7RTU1 214 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 RPUSD4Q96CM3 377 aaKnown RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 PYGO2Q9BRQ0 406 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 TMEM14BQ9NUH8 114 aa12.31□□□□□ -0.44
SCFD2-201ENST00000388940 CNOT1A5YKK6 2376 aaKnown RBP12.31□□□□□ -0.44
SCFD2-201ENST00000388940 LOC400499M0QZD8 3231 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 VENTXO95231 258 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 PFN1P07737 140 aaKnown RBP12.3□□□□□ -0.44
SCFD2-201ENST00000388940 RD3LP0DJH9 198 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 MRPS11P82912 194 aaKnown RBP12.3□□□□□ -0.44
SCFD2-201ENST00000388940 TMEM170AQ8WVE7 144 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 TP53TG5Q9Y2B4 290 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 DYSFO75923 2080 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 PHOX2AO14813 284 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 TCAPO15273 167 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 KLK10O43240 276 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 HSPE1P61604 102 aaKnown RBP12.3□□□□□ -0.44
SCFD2-201ENST00000388940 LEAP2Q969E1 77 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 RHOVQ96L33 236 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 ELOVL5Q9NYP7 299 aa12.3□□□□□ -0.44
SCFD2-201ENST00000388940 YIF1AO95070 293 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 IL6RP08887 468 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-201ENST00000388940 OR4A47Q6IF82 309 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 DUX4L9Q6RFH8 374 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-201ENST00000388940 C16orf82Q7Z2V1 217 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 ZNF383Q8NA42 475 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 ANAPC16Q96DE5 110 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 MGST2Q99735 147 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 MS4A5Q9H3V2 200 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 NPVFQ9HCQ7 196 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 KCNIP2Q9NS61 270 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 LSM4Q9Y4Z0 139 aaKnown RBP12.29□□□□□ -0.44
SCFD2-201ENST00000388940 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
SCFD2-201ENST00000388940 A0A1W2PPV4 95 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 C11orf94C9JXX5 98 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 PDE6DO43924 150 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 HRASP01112 189 aa12.29□□□□□ -0.44
SCFD2-201ENST00000388940 BMP5P22003 454 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms