RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TAGLN2P37802 199 aaKnown RBP18.95■□□□□ 0.62
VPS16-201ENST00000380443 GNG10P50151 68 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 HAGHQ16775 308 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 OR4A47Q6IF82 309 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 TMEM14BQ9NUH8 114 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 SLC39A9Q9NUM3 307 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 TCF19Q9Y242 345 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 ICE1Q9Y2F5 2266 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 IFNA10P01566 189 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 IL6RP08887 468 aaPredicted RBP18.94■□□□□ 0.62
VPS16-201ENST00000380443 CT45A6P0DMU7 189 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 CT45A5P0DMU8 189 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 CT45A7P0DMV0 189 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 ATP5IP56385 69 aaPredicted RBP18.94■□□□□ 0.62
VPS16-201ENST00000380443 UTF1Q5T230 341 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 P2RX4Q99571 388 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 SLC35D1Q9NTN3 355 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 ZNF257Q9Y2Q1 563 aa18.94■□□□□ 0.62
VPS16-201ENST00000380443 OR13C7P0DN81 318 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 DLK1P80370 383 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 HFEQ30201 348 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 AWAT1Q58HT5 328 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 C15orf54Q8N8G6 183 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 VSIRQ9H7M9 311 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 FKBP11Q9NYL4 201 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 WDR83OSQ9Y284 106 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 TRBV23-1A0A0A0MS06 115 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 FAM90A27PA6NNH2 459 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 ZNF726P1Q15940 193 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 RBMS3Q6XE24 437 aaKnown RBP18.93■□□□□ 0.62
VPS16-201ENST00000380443 NEUROG1Q92886 237 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 NPCDR1Q9BY65 106 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 ENY2Q9NPA8 101 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 RPS10P5Q9NQ39 176 aa18.93■□□□□ 0.62
VPS16-201ENST00000380443 HCFC1P51610 2035 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 CTXND1A0A1B0GTU2 59 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 C7orf77A4D0Y5 90 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 MAP1LC3B2A6NCE7 125 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 M0R036 132 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 BCL2P10415 239 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 CD1BP29016 333 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 ETV3LQ6ZN32 361 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 VKORC1L1Q8N0U8 176 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 OSR1Q8TAX0 266 aaPredicted RBP18.92■□□□□ 0.62
VPS16-201ENST00000380443 LINC01560Q8TB33 94 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 ACTR3CQ9C0K3 210 aaPredicted RBP18.92■□□□□ 0.62
VPS16-201ENST00000380443 MAP1LC3BQ9GZQ8 125 aa18.92■□□□□ 0.62
VPS16-201ENST00000380443 DIDO1Q9BTC0 2240 aaKnown RBP18.92■□□□□ 0.62
VPS16-201ENST00000380443 DVL1O14640 695 aa18.91■□□□□ 0.62
VPS16-201ENST00000380443 APOA2P02652 100 aa18.91■□□□□ 0.62
VPS16-201ENST00000380443 HOXA1P49639 335 aaPredicted RBP18.91■□□□□ 0.62
VPS16-201ENST00000380443 SPINK9Q5DT21 86 aa18.91■□□□□ 0.62
VPS16-201ENST00000380443 OR13D1Q8NGV5 346 aa18.91■□□□□ 0.62
VPS16-201ENST00000380443 TMEM186Q96B77 213 aa18.91■□□□□ 0.62
VPS16-201ENST00000380443 A0A087X0M5 115 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 TRAV3A0A0B4J244 114 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 A0A1B0GX30 115 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 ELLP55199 621 aaPredicted RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 FLI1Q01543 452 aaPredicted RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 ACOT6Q3I5F7 207 aaPredicted RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 ZNF672Q499Z4 452 aaPredicted RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 LCN15Q6UWW0 184 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 LYPD2Q6UXB3 125 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 RXFP4Q8TDU9 374 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 H1FXQ92522 213 aaKnown RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 BET1LQ9NYM9 111 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 GNG13Q9P2W3 67 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 UPK2O00526 184 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 CYB5BO43169 146 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 PPOXP50336 477 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 FFAR4Q5NUL3 377 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 MUC15Q8N387 334 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 RPP25LQ8N5L8 163 aaKnown RBP18.9■□□□□ 0.62
VPS16-201ENST00000380443 LHX4Q969G2 390 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 KCNIP2Q9NS61 270 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 VAX2Q9UIW0 290 aa18.9■□□□□ 0.62
VPS16-201ENST00000380443 FNDC10F2Z333 226 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 SNRNP70P08621 437 aaKnown RBP18.89■□□□□ 0.61
VPS16-201ENST00000380443 LOXP28300 417 aaPredicted RBP18.89■□□□□ 0.61
VPS16-201ENST00000380443 TMEM155Q4W5P6 130 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 ACSM6Q6P461 480 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 OR10G9Q8NGN4 311 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 OR10G7Q8NGN6 311 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 TMEM204Q9BSN7 226 aa18.89■□□□□ 0.61
VPS16-201ENST00000380443 FCN3O75636 299 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 PLA2G2AP14555 144 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 CCL3L1P16619 93 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 DLX6P56179 175 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 ADORA2A-AS1P86434 159 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 FAM122CQ6P4D5 195 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 OR5AN1Q8NGI8 311 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 CTSZQ9UBR2 303 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 OR51B2Q9Y5P1 312 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 POLEQ07864 2286 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 PRSS46E5RG02 174 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 ZNF137PP52743 207 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 TFF3Q07654 80 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 SLC35E3Q7Z769 313 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 PCNX1Q96RV3 2341 aa18.88■□□□□ 0.61
VPS16-201ENST00000380443 J3QKU1 62 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms