RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 TBR1Q16650 682 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 SRSF12Q8WXF0 261 aaKnown RBP8.19□□□□□ -1.1
SNX1-202ENST00000380285 IGKV1D-42A0A075B6H8 117 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 TRIP6Q15654 476 aaKnown RBP8.19□□□□□ -1.1
SNX1-202ENST00000380285 ZG16O60844 167 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 TM4SF20Q53R12 229 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 HES3Q5TGS1 186 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 LRTM2Q8N967 370 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 A0A1B0GW64 132 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 TM4SF5O14894 197 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 GDF9O60383 454 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 WNT2BQ93097 391 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 AICDAQ9GZX7 198 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 ALPK2Q86TB3 2170 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 UBE2L6O14933 153 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 PRSS12P56730 875 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 TTC9CQ8N5M4 171 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 CACNA1IQ9P0X4 2223 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 FGF16O43320 207 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 CBLN1P23435 193 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 CX3CL1P78423 397 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 OR5A1Q8NGJ0 315 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 PRDM13Q9H4Q3 707 aa8.19□□□□□ -1.1
SNX1-202ENST00000380285 BRCA1P38398 1863 aaKnown RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 DNAL4O96015 105 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 SNAI3Q3KNW1 292 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 FAM90A1Q86YD7 464 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 GTF3AQ92664 365 aaKnown RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 NYNRINQ9P2P1 1898 aaKnown RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 RNF222A6NCQ9 220 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 RND2P52198 227 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 C1orf185Q5T7R7 199 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 OSR1Q8TAX0 266 aaPredicted RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 RPP25Q9BUL9 199 aaKnown RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 IGHV3OR15-7A0A075B7D8 119 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 DLX6P56179 175 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 SHANK3Q9BYB0 1731 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 DRAM1Q8N682 238 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 OR9G1Q8NH87 305 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 SP7Q8TDD2 431 aaPredicted RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 RNASEH2CQ8TDP1 164 aaKnown RBP8.18□□□□□ -1.1
SNX1-202ENST00000380285 A0A1W2PQF6 199 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 H7C1H1 209 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 SSTR5P35346 364 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 OR5P3Q8WZ94 311 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 PRELID3AQ96N28 172 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 CRISPLD2Q9H0B8 497 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 JKAMPQ9P055 326 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 GRIFINA4D1Z8 144 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 LINC01549A6NIU2 74 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 FAM90A27PA6NNH2 459 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 SFTPCP11686 197 aa8.18□□□□□ -1.1
SNX1-202ENST00000380285 IL11P20809 199 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 MRPL16Q9NX20 251 aaKnown RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 MOB4Q9Y3A3 225 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 THSD7AQ9UPZ6 1657 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 FAM90A9PA6NNJ1 464 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 AGFG2O95081 481 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 TYMSP04818 313 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 IGHV4-34P06331 123 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 ECSCRQ19T08 205 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 CIARTQ8N365 385 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 A0A0G2JMZ2 1700 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 IGFBP3P17936 291 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 ID4P47928 161 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 FHITP49789 147 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 SIGLEC14Q08ET2 396 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 FXYD3Q14802 87 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 ZNF324BQ6AW86 544 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 BIVMQ86UB2 503 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 COL11A2P13942 1736 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 ANK1P16157 1881 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 TRBV23-1A0A0A0MS06 115 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 TRAV39A0A0B4J263 110 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 C1QCP02747 245 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 MNX1P50219 401 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 RTBDNQ9BSG5 229 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 AKIRIN1Q9H9L7 192 aaPredicted RBP8.17□□□□□ -1.1
SNX1-202ENST00000380285 TMEM262E9PQX1 116 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 GHRHP01286 108 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 LOXL3P58215 753 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 PRSS53Q2L4Q9 553 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 MUC15Q8N387 334 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 FAM169BQ8N8A8 192 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 GPR82Q96P67 336 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 TRAV14DV4A0A0A6YYC5 116 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 WNT5BQ9H1J7 359 aa8.17□□□□□ -1.1
SNX1-202ENST00000380285 C7orf71A4D174 169 aa8.16□□□□□ -1.1
SNX1-202ENST00000380285 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms