RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PTGES3LE9PB15 166 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 HSMCR30P0CW71 290 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 CD37P11049 281 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 AREGP15514 252 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 RPL35AP18077 110 aaKnown RBP13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 CRHBPP24387 322 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 MAP2K4P45985 399 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 SPHARQ15513 63 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 OR4A47Q6IF82 309 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 UNQ9165/PRO28630Q6UXU0 137 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 H1FOOQ8IZA3 346 aaPredicted RBP13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 PLCXD1Q9NUJ7 323 aa13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 MRPS7Q9Y2R9 242 aaKnown RBP13.23□□□□□ -0.29
PDLIM4-202ENST00000379018 DNAH10Q8IVF4 4471 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 A8MWP6 167 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 E7EUB6 86 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 CDK1P06493 297 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 IL6RP08887 468 aaPredicted RBP13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 DEFA4P12838 97 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 CALRP27797 417 aaKnown RBP13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 RPL5P46777 297 aaKnown RBP13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 ARFRP1Q13795 201 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 TMEM91Q6ZNR0 172 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 SSX9Q7RTT3 188 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 OR51E2Q9H255 320 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 FKBP14Q9NWM8 211 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 PRELID3BQ9Y3B1 194 aa13.22□□□□□ -0.29
PDLIM4-202ENST00000379018 IGKV1D-8A0A087WSZ0 117 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 MFSD2BA6NFX1 497 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 MYOD1P15172 320 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 TALDO1P37837 337 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 RPL30P62888 115 aaKnown RBP13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 WFDC3Q8IUB2 231 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 SLC38A6Q8IZM9 456 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 FBLIM1Q8WUP2 373 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 FANCD2OSQ96PS1 177 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 RAB22AQ9UL26 194 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 TP53TG1Q9Y2A0 90 aa13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 LSM2Q9Y333 95 aaKnown RBP13.21□□□□□ -0.29
PDLIM4-202ENST00000379018 A0A1B0GW64 132 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 KBTBD11O94819 623 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 CLEC3BP05452 202 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 NFYAP23511 347 aaPredicted RBP13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 GADD45AP24522 165 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 PSMB6P28072 239 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 GPR183P32249 361 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 PSMD7P51665 324 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 Q6ZWC4 215 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 OR2C3Q8N628 320 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 OR10R2Q8NGX6 335 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 TCTEX1D2Q8WW35 142 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 OR2A7Q96R45 310 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 SLC2A9Q9NRM0 540 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 SPATA2Q9UM82 520 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 V9GY05 133 aa13.2□□□□□ -0.3
PDLIM4-202ENST00000379018 MFNGO00587 321 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 ARL6IP5O75915 188 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 DHFRP00374 187 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 HIST1H1DP16402 221 aaKnown RBP13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 CD36P16671 472 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 TMEM217Q8N7C4 229 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 CNBD2Q96M20 576 aa13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
PDLIM4-202ENST00000379018 TRAV25A0A0B4J276 109 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 DIRAS3O95661 229 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 ZNF735P0CB33 412 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 RPA2P15927 270 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 LGALS9CQ6DKI2 356 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 OR4S2Q8NH73 311 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 VSTM2AQ8TAG5 236 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 RNF183Q96D59 192 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 GPHA2Q96T91 129 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 FBXL17Q9UF56 701 aa13.18□□□□□ -0.3
PDLIM4-202ENST00000379018 UBE2CO00762 179 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 S1PR2O95136 353 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 OR10A3P58181 314 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 OR5B3Q8NH48 314 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 MARC2Q969Z3 335 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 TAS2R8Q9NYW2 309 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 MRPL27Q9P0M9 148 aaKnown RBP13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 UFC1Q9Y3C8 167 aa13.17□□□□□ -0.3
PDLIM4-202ENST00000379018 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 IGKV1D-13A0A0B4J2D9 117 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 ZNF701M0R085 212 aaPredicted RBP13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 CRYGCP07315 174 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 IGKV1-13P0DP09 117 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 CTRB1P17538 263 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 ALDH3B2P48448 385 aa13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 NANOS2P60321 138 aaKnown RBP13.16□□□□□ -0.3
PDLIM4-202ENST00000379018 CTRB2Q6GPI1 263 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms