RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TOX4O94842 621 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 GAMTQ14353 236 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 COLCA1Q6ZS62 124 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 BTF3L4Q96K17 158 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 LYRM2Q9NU23 88 aaPredicted RBP11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 SLC45A2Q9UMX9 530 aa11.92□□□□□ -0.5
SHROOM1-203ENST00000378679 ANKRD11Q6UB99 2663 aaPredicted RBP11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 LYNX1G3V0Z9 82 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 PSPNO60542 156 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 LYNX1P0DP58 116 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 CD1BP29016 333 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 IGFL3Q6UXB1 125 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 LSM10Q969L4 123 aaKnown RBP11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 GGACTQ9BVM4 153 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 ALPK3Q96L96 1907 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 CLDN34H7C241 214 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 IGHV1-46P01743 117 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 KRTDAPP60985 99 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 RPL8P62917 257 aaKnown RBP11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 NHLH1Q02575 133 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 OR2T6Q8NHC8 308 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 DMRTA2Q96SC8 542 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 IGHV3-21A0A0B4J1V1 117 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 KBTBD11-OT1A0A1B0GTJ5 212 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 C17orf98A8MV24 154 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 SEC14L6B5MCN3 397 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 SELLP14151 372 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 RPL27AP46776 148 aaKnown RBP11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 C5orf24Q7Z6I8 188 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 ATG101Q9BSB4 218 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 PARP11Q9NR21 331 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 WASHC3Q9Y3C0 194 aa11.91□□□□□ -0.5
SHROOM1-203ENST00000378679 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 SULT1A2P50226 295 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 HSPE1P61604 102 aaKnown RBP11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 PRR27Q6MZM9 219 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 TEPPQ6URK8 271 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 SRRM5B3KS81 715 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 FAM90A26D6RGX4 464 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 IGKV3-15P01624 115 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 CCL3L1P16619 93 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 HTR1DP28221 377 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 ATP5J2P56134 94 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 FAM90A1Q86YD7 464 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 AP1S3Q96PC3 154 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 LIPFP07098 398 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 RND3P61587 244 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 UNQ6494/PRO21346Q6UXR6 183 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 TCF19Q9Y242 345 aa11.9□□□□□ -0.5
SHROOM1-203ENST00000378679 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 C10orf142B7Z368 130 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 ZNF146Q15072 292 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 LHFPL1Q86WI0 220 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 RASL11BQ9BPW5 248 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 NPVFQ9HCQ7 196 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 ZNF503-AS2A6NEH8 195 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 CT45A10P0DMU9 189 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 COX6B1P14854 86 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 ZNF90Q03938 601 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 DHRS7BQ6IAN0 325 aaPredicted RBP11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 HCP5Q6MZN7 132 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 TNFRSF19Q9NS68 423 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 PCNX3Q9H6A9 2034 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 LOC105371242A0A075B767 164 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 CBY3A6NI87 242 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 CLEC3BP05452 202 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 LYZP61626 148 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 SERF2P84101 59 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 PNKDQ8N490 385 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 OR4P4Q8NGL7 312 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 MPZP25189 248 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 MBNL2Q5VZF2 373 aaKnown RBP11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
SHROOM1-203ENST00000378679 CHD8Q9HCK8 2581 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 KBTBD11O94819 623 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 TMEM241Q24JQ0 296 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 BLNKQ8WV28 456 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 ELOVL1Q9BW60 279 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 CLEC7AQ9BXN2 247 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 A1L4Q6 167 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 MLNRO43193 412 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 GNG7O60262 68 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 NAPSAO96009 420 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 CNN1P51911 297 aaKnown RBP11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 UBE2L3P68036 154 aaKnown RBP11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 TMEM30BQ3MIR4 351 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 TMEM186Q96B77 213 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 COA4Q9NYJ1 87 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 FUT9Q9Y231 359 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 MYO18BQ8IUG5 2567 aa11.88□□□□□ -0.51
SHROOM1-203ENST00000378679 SLC35E3Q7Z769 313 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms