RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 ELOVL5Q9NYP7 299 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 H0YL77 283 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 H3BVH4 76 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 DNASE2O00115 360 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-201ENST00000378156 HILPDAQ9Y5L2 63 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF735P0CB33 412 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 CALHM1Q8IU99 346 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 DANCRP0C864 163 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 CD59P13987 128 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 GUCD1Q96NT3 240 aa12.78□□□□□ -0.36
NPHP4-201ENST00000378156 ZNF788Q6ZQV5 615 aa12.77□□□□□ -0.36
NPHP4-201ENST00000378156 GBGT1Q8N5D6 347 aa12.77□□□□□ -0.36
NPHP4-201ENST00000378156 PAXXQ9BUH6 204 aa12.77□□□□□ -0.36
NPHP4-201ENST00000378156 IDI2-AS1Q9NZ38 188 aa12.77□□□□□ -0.36
NPHP4-201ENST00000378156 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 E9PQ18 207 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 NMUP48645 174 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 RND3P61587 244 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 VOPP1Q96AW1 172 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 CARHSP1Q9Y2V2 147 aaKnown RBP12.77□□□□□ -0.37
NPHP4-201ENST00000378156 PXMP4Q9Y6I8 212 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 FBLL1A6NHQ2 334 aaKnown RBP12.77□□□□□ -0.37
NPHP4-201ENST00000378156 IBA57Q5T440 356 aaKnown RBP12.77□□□□□ -0.37
NPHP4-201ENST00000378156 PQLC2Q6ZP29 291 aa12.77□□□□□ -0.37
NPHP4-201ENST00000378156 C1orf162Q8NEQ5 155 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-201ENST00000378156 TAF15Q92804 592 aaKnown RBP eCLIP12.77□□□□□ -0.37
NPHP4-201ENST00000378156 TRBV9A0A0B4J1U6 114 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 EFNA2O43921 213 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 LEPROTL1O95214 131 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 TRGC1P0CF51 173 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 ZNF137PP52743 207 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 UCP3P55916 312 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 ECSCRQ19T08 205 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 OR5R1Q8NH85 324 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 JPT1Q9UK76 154 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 AGAP20933 346 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 LHX2P50458 406 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 SELENOTP62341 195 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 MUC15Q8N387 334 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 WDYHV1Q96HA8 205 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 REPIN1Q9BWE0 567 aaKnown RBP12.76□□□□□ -0.37
NPHP4-201ENST00000378156 C1QTNF5Q9BXJ0 243 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 FOLR2P14207 255 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 RPL8P62917 257 aaKnown RBP12.76□□□□□ -0.37
NPHP4-201ENST00000378156 TMEM70Q9BUB7 260 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 MRPL18Q9H0U6 180 aaKnown RBP12.76□□□□□ -0.37
NPHP4-201ENST00000378156 DEPPQ9NTK1 212 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 IGHV3-21A0A0B4J1V1 117 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 CLPSP04118 112 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
NPHP4-201ENST00000378156 M0R3E3 92 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 COX6CP09669 75 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 MMD2Q8IY49 270 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 RNF126Q9BV68 326 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 B9A039 149 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 COMPP49747 757 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-201ENST00000378156 RELBQ01201 579 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 WDR25Q64LD2 544 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-201ENST00000378156 FAM131CQ96AQ9 280 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-201ENST00000378156 THADAQ6YHU6 1953 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 NUBP1P53384 320 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 LINC01560Q8TB33 94 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 ZCCHC14Q8WYQ9 949 aaKnown RBP12.75□□□□□ -0.37
NPHP4-201ENST00000378156 PMCHL2Q9BQD1 86 aa12.75□□□□□ -0.37
NPHP4-201ENST00000378156 COX6B1P14854 86 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 LYZL4Q96KX0 146 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 PPIAL4CA0A0B4J2A2 164 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 IGHV1-69-2A0A0G2JMI3 117 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 A0A1B0GV90 55 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 WNT9BO14905 357 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 PPIAL4GP0DN37 164 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 PLAURQ03405 335 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 ACSF3Q4G176 576 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-201ENST00000378156 TMEM183AQ8IXX5 376 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 FAM222BQ8WU58 562 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 RBKSQ9H477 322 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 A0A0A6YYD4 124 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 OR4C46A6NHA9 309 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 ZNF729A6NN14 1252 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-201ENST00000378156 H0YIZ8 118 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 KIR2DL2P43627 348 aaPredicted RBP12.74□□□□□ -0.37
NPHP4-201ENST00000378156 FHL1Q13642 323 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 ZNRF1Q8ND25 227 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 FAM57AQ8TBR7 257 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 HYPMO75409 117 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 CBLN4Q9NTU7 201 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
NPHP4-201ENST00000378156 TRBV23-1A0A0A0MS06 115 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 MARCH11A6NNE9 402 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 IGHV1-2P23083 117 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 ARF6P62330 175 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 PSG7Q13046 419 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 LEAP2Q969E1 77 aa12.73□□□□□ -0.37
NPHP4-201ENST00000378156 SPOCK3Q9BQ16 436 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms