RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 IGKV1D-12P01611 117 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 LINC00614P0C842 121 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 CA7P43166 264 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 TMEM108Q6UXF1 575 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 RTN4RL2Q86UN3 420 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 CLDN16Q9Y5I7 305 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 PLXND1Q9Y4D7 1925 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 HLA-DRB1P01911 266 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 PMS2CLQ68D20 193 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 DIRC2Q96SL1 478 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 IGKV1-27A0A075B6S5 117 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 A0A1W2PQM1 296 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 EFNA2O43921 213 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 HBBP68871 147 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
PCDH9-202ENST00000377865 ACP7Q6ZNF0 438 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 SSX8Q7RTT4 187 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 C5orf17Q8NAS9 161 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 DCAF16Q9NXF7 216 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 HEATR5BQ9P2D3 2071 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 C17orf98A8MV24 154 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 NDUFS6O75380 124 aaKnown RBP7.41□□□□□ -1.22
PCDH9-202ENST00000377865 MNX1P50219 401 aaPredicted RBP7.41□□□□□ -1.22
PCDH9-202ENST00000377865 DMRTA1Q5VZB9 504 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 FAM90A2PQ658T7 463 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
PCDH9-202ENST00000377865 ZNF785A8K8V0 405 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 TNFSF10P50591 281 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 DEFB109BQ30KR1 87 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 C17orf82Q86X59 251 aaPredicted RBP7.4□□□□□ -1.22
PCDH9-202ENST00000377865 OR51G1Q8NGK1 321 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 MS4A5Q9H3V2 200 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 FSCN3Q9NQT6 498 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 THYN1Q9P016 225 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 SH3BGRL2Q9UJC5 107 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 NAPSAO96009 420 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 EGR1P18146 543 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 RPL8P62917 257 aaKnown RBP7.4□□□□□ -1.22
PCDH9-202ENST00000377865 RSPO4Q2I0M5 234 aaPredicted RBP7.4□□□□□ -1.22
PCDH9-202ENST00000377865 FAM214BQ7L5A3 538 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 FAM90A1Q86YD7 464 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 KLF14Q8TD94 323 aaPredicted RBP7.4□□□□□ -1.22
PCDH9-202ENST00000377865 WBP1Q96G27 269 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 LY96Q9Y6Y9 160 aa7.4□□□□□ -1.22
PCDH9-202ENST00000377865 OR2T8A6NH00 312 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 LIPFP07098 398 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF137PP52743 207 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 PLPPR1Q8TBJ4 325 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF837Q96EG3 531 aaPredicted RBP7.4□□□□□ -1.23
PCDH9-202ENST00000377865 TRAV24A0A0B4J272 114 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 EPOPA6NHQ4 379 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 OTX1P32242 354 aaPredicted RBP7.4□□□□□ -1.23
PCDH9-202ENST00000377865 ABHD12Q8N2K0 398 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 TPRX1Q8N7U7 411 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 KLHDC3Q9BQ90 382 aa7.4□□□□□ -1.23
PCDH9-202ENST00000377865 MRPL37Q9BZE1 423 aaKnown RBP7.4□□□□□ -1.23
PCDH9-202ENST00000377865 PEF1Q9UBV8 284 aaKnown RBP7.4□□□□□ -1.23
PCDH9-202ENST00000377865 NPIPB11E5RHQ5 1161 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 SLC17A3O00476 420 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 MC5RP33032 325 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 COMPP49747 757 aaPredicted RBP7.39□□□□□ -1.23
PCDH9-202ENST00000377865 OR8B3Q8NGG8 313 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 IQCF6A8MYZ5 107 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 C1QTNF9BB2RNN3 333 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 TMPRSS2O15393 492 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 PRNTQ86SH4 94 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 SMIM12Q96EX1 92 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 C1orf147Q96MC9 270 aaPredicted RBP7.39□□□□□ -1.23
PCDH9-202ENST00000377865 OPN3Q9H1Y3 402 aaPredicted RBP7.39□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF716A6NP11 495 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 ETV2O00321 342 aaPredicted RBP7.39□□□□□ -1.23
PCDH9-202ENST00000377865 C1QTNF9P0C862 333 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 TBR1Q16650 682 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF826PQ6ZT77 177 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 RNF144BQ7Z419 303 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 OR52E5Q8NH55 327 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 WDR83OSQ9Y284 106 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 CEACAM3P40198 252 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 IL15RAQ13261 267 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 TEX38Q6PEX7 206 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 ZIC4Q8N9L1 334 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 RAB1CQ92928 201 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 SNRNP40Q96DI7 357 aaKnown RBP7.39□□□□□ -1.23
PCDH9-202ENST00000377865 ZNF714Q96N38 554 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 SCNM1Q9BWG6 230 aa7.39□□□□□ -1.23
PCDH9-202ENST00000377865 C9JCJ5 164 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 CGAP01215 116 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 GZMBP10144 247 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 RPS20P60866 119 aaKnown RBP7.38□□□□□ -1.23
PCDH9-202ENST00000377865 OR10AG1Q8NH19 301 aa7.38□□□□□ -1.23
PCDH9-202ENST00000377865 EAF1Q96JC9 268 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms