RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 INTS1Q8N201 2190 aaKnown RBP9.69□□□□□ -0.86
TNFRSF9-201ENST00000377507 DOCK11Q5JSL3 2073 aa9.69□□□□□ -0.86
TNFRSF9-201ENST00000377507 TRAV38-1A0A0B4J264 116 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 C15orf61A6NNL5 157 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 TYMSP04818 313 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 STAG3L2P0CL84 134 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 STAG3L3P0CL85 134 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 SRP14P37108 136 aaKnown RBP9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 EDDM3BP56851 147 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 POU2AF1Q16633 256 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 Q6ZS92 163 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 ITLN1Q8WWA0 313 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 OR5B12Q96R08 314 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 GGTLC1Q9BX51 225 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 MS4A5Q9H3V2 200 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 TCF19Q9Y242 345 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 IL6RP08887 468 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 FAM3BP58499 235 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 GNB1P62873 340 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 STUMQ69YW2 141 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 ABHD12Q8N2K0 398 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 ZNF439Q8NDP4 499 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 TMEM14BQ9NUH8 114 aa9.68□□□□□ -0.86
TNFRSF9-201ENST00000377507 SAA2-SAA4A0A096LPE2 208 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 A0A1W2PPV4 95 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 PPP5D1E7EU14 171 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 F6UZH7 168 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 SPRY3O43610 288 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 SAA2P0DJI9 122 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 HIST1H1BP16401 226 aaKnown RBP9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 THBS3P49746 956 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 RTP5Q14D33 572 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 TMEM183AQ8IXX5 376 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 CORO2AQ92828 525 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 IMMP2LQ96T52 175 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 FAM234AQ9H0X4 552 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 GCM1Q9NP62 436 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 RNF7Q9UBF6 113 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 IL19Q9UHD0 177 aa9.67□□□□□ -0.86
TNFRSF9-201ENST00000377507 ZNF729A6NN14 1252 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 FNDC10F2Z333 226 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 IGHV3-7P01780 117 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 SELLP14151 372 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 ATP5G3P48201 142 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 PDLIM4P50479 330 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 HSPE1P61604 102 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 LCN2P80188 198 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 TMEM30BQ3MIR4 351 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 C1orf185Q5T7R7 199 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 OR4A47Q6IF82 309 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 TCF23Q7RTU1 214 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 LURAP1LQ8IV03 231 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 RPRMLQ8N4K4 120 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 ZNF383Q8NA42 475 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 ADTRPQ96IZ2 230 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 RHOVQ96L33 236 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 HIST1H2BLQ99880 126 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 PCGF1Q9BSM1 259 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 ELOVL1Q9BW60 279 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 PRDM13Q9H4Q3 707 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 LOC400499M0QZD8 3231 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 HEATR1Q9H583 2144 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 SPENQ96T58 3664 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 TRAV20A0A0B4J274 112 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 CXorf1O96002 111 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 CEACAM8P31997 349 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 ARSJQ5FYB0 599 aaPredicted RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 FAM201AQ5SY85 155 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 MIC13Q5XKP0 118 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 CISD2Q8N5K1 135 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 NECAP1Q8NC96 275 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 OR2T10Q8NGZ9 312 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 RNASEH2CQ8TDP1 164 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 GAFA1Q96PS6 74 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 SFXN3Q9BWM7 321 aa9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 PATZ1Q9HBE1 687 aaKnown RBP9.66□□□□□ -0.86
TNFRSF9-201ENST00000377507 HCFC1P51610 2035 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 TRGV10A0A0A0MS01 117 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 TM4SF5O14894 197 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 NDUFB4O95168 129 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 IGHV1-46P01743 117 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 FABP4P15090 132 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 PDZD11Q5EBL8 140 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 ACTL10Q5JWF8 245 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 ZNF788Q6ZQV5 615 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 LEAP2Q969E1 77 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 ACY3Q96HD9 319 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 CHODLQ9H9P2 273 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 IDI2-AS1Q9NZ38 188 aa9.65□□□□□ -0.86
TNFRSF9-201ENST00000377507 NPY1RP25929 384 aa9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 RPL29P47914 159 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-201ENST00000377507 MRPS11P82912 194 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms