RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 TMEM229AB2RXF0 380 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 MOSPD3O75425 235 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 DRD3P35462 400 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 SRSF5Q13243 272 aaKnown RBP10.75□□□□□ -0.69
VPS13A-204ENST00000376634 PSMG3Q9BT73 122 aaPredicted RBP10.75□□□□□ -0.69
VPS13A-204ENST00000376634 VSIG8P0DPA2 414 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 CCL4P13236 92 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 MIC13Q5XKP0 118 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 CLEC7AQ9BXN2 247 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 ST6GALNAC2Q9UJ37 374 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 RNF115Q9Y4L5 304 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 PEX11BO96011 259 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 ZIC1Q15915 447 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 TMEM160Q9NX00 188 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 FAM209AQ5JX71 171 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 DOPEY1Q5JWR5 2465 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 MALP21145 153 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 TUBD1Q9UJT1 453 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 A0A0G2JMZ2 1700 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 LRRC37AA6NMS7 1700 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 MPV17P39210 176 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 FAM27BQ5VT28 67 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 SIGLEC14Q08ET2 396 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 RPP25Q9BUL9 199 aaKnown RBP10.75□□□□□ -0.69
VPS13A-204ENST00000376634 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 C7orf66A4D0T2 115 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 FGF11Q92914 225 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 AICDAQ9GZX7 198 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 LOC105371242A0A075B767 164 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 HSPB1P04792 205 aaKnown RBP10.74□□□□□ -0.69
VPS13A-204ENST00000376634 RUNX1Q01196 453 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 CBLN4Q9NTU7 201 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-204ENST00000376634 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
VPS13A-204ENST00000376634 OR5AC2Q9NZP5 309 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 OR2H2O95918 312 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 TSPAN7P41732 249 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 TRBV20OR9-2A0A075B6H5 130 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 ODAMA1E959 279 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 COL9A1P20849 921 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 HBBP68871 147 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 ZNF721Q8TF20 911 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 DMRTA2Q96SC8 542 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 CA1P00915 261 aaPredicted RBP10.74□□□□□ -0.69
VPS13A-204ENST00000376634 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 TNFRSF9Q07011 255 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 FXYD3Q14802 87 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 KIAA0040Q15053 153 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 NEUROG1Q92886 237 aa10.74□□□□□ -0.69
VPS13A-204ENST00000376634 CISD1Q9NZ45 108 aaKnown RBP10.74□□□□□ -0.69
VPS13A-204ENST00000376634 LY6EQ16553 131 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 SAPCD1Q5SSQ6 148 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 MRPL32Q9BYC8 188 aaKnown RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 MRPS18BQ9Y676 258 aaKnown RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 PCSK4Q6UW60 755 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 OPN3Q9H1Y3 402 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 FOXI3A8MTJ6 420 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 ZNF250P15622 560 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 CENPVQ7Z7K6 275 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 BDP1A6H8Y1 2624 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 AGAP20933 346 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 ZNF488Q96MN9 340 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 RND2P52198 227 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 SPSB4Q96A44 273 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 SPCS1Q9Y6A9 102 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
VPS13A-204ENST00000376634 FAM219BQ5XKK7 198 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 AHRRA9YTQ3 701 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 CNTFRP26992 372 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 CLDND2Q8NHS1 167 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 SDF2L1Q9HCN8 221 aa10.73□□□□□ -0.69
VPS13A-204ENST00000376634 NPPCP23582 126 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 FAM214BQ7L5A3 538 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 C10orf111Q8N326 155 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 OR2K2Q8NGT1 345 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 FAM90A26D6RGX4 464 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 SPNS2Q8IVW8 549 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 FTH1P19P0C7X4 201 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 LHX8Q68G74 356 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 CFAP161Q6P656 301 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 YBX2Q9Y2T7 364 aaKnown RBP10.72□□□□□ -0.69
VPS13A-204ENST00000376634 TRBV7-9A0A0J9YWB2 115 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 SPAARA0A1B0GVQ0 90 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 FSTP19883 344 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 CALYQ9NYX4 217 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 NPIPB11E5RHQ5 1161 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 EFNB2P52799 333 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 ZNF146Q15072 292 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 ITLN1Q8WWA0 313 aa10.72□□□□□ -0.69
VPS13A-204ENST00000376634 RBMY1BA6NDE4 496 aaKnown RBP10.72□□□□□ -0.69
VPS13A-204ENST00000376634 RBMY1EA6NEQ0 496 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms