RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 BATFQ16520 125 aa11.6□□□□□ -0.55
MSH5-202ENST00000375740 TRAT1Q6PIZ9 186 aa11.6□□□□□ -0.55
MSH5-202ENST00000375740 HAPLN4Q86UW8 402 aa11.6□□□□□ -0.55
MSH5-202ENST00000375740 CISD2Q8N5K1 135 aaKnown RBP11.6□□□□□ -0.55
MSH5-202ENST00000375740 PLPPR2Q96GM1 343 aa11.6□□□□□ -0.55
MSH5-202ENST00000375740 LAMA5O15230 3695 aa11.6□□□□□ -0.55
MSH5-202ENST00000375740 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 MGST3O14880 152 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 HPRT1P00492 218 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 ADH4P08319 380 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 MSMO1Q15800 293 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 SPANXN5Q5MJ07 72 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 FAM201AQ5SY85 155 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 SLC25A24Q6NUK1 477 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 RPUSD4Q96CM3 377 aaKnown RBP11.59□□□□□ -0.55
MSH5-202ENST00000375740 SMIM7Q9BQ49 75 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 AGMATQ9BSE5 352 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 CTDSP1Q9GZU7 261 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 LPAR2Q9HBW0 351 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 TRAV1-1A0A0B4J248 108 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 LINC00473A8K010 186 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 HMGB3O15347 200 aaKnown RBP11.59□□□□□ -0.55
MSH5-202ENST00000375740 P0C879 139 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 GBGT1Q8N5D6 347 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 SDSLQ96GA7 329 aa11.59□□□□□ -0.55
MSH5-202ENST00000375740 A0A0G2JNJ9 132 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
MSH5-202ENST00000375740 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
MSH5-202ENST00000375740 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
MSH5-202ENST00000375740 CD40P25942 277 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 RPL23P62829 140 aaKnown RBP11.58□□□□□ -0.56
MSH5-202ENST00000375740 FOXC1Q12948 553 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 TBX15Q96SF7 602 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 HIPK2Q9H2X6 1198 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 Q9UFV3 132 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 NAGKQ9UJ70 344 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 PRRG2O14669 202 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 BRS3P32247 399 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 GAGE1Q13065 139 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 ZNF525Q8N782 197 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.56
MSH5-202ENST00000375740 MUC6Q6W4X9 2439 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 LRRC30A6NM36 301 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 EDDM3BP56851 147 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 FAM3BP58499 235 aaPredicted RBP11.57□□□□□ -0.56
MSH5-202ENST00000375740 SELENOVP59797 346 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 CR1LQ2VPA4 569 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 MORN2Q502X0 79 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 Q8NA96 180 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 HSD17B10Q99714 261 aaKnown RBP11.57□□□□□ -0.56
MSH5-202ENST00000375740 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
MSH5-202ENST00000375740 GNG12Q9UBI6 72 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 HSPB7Q9UBY9 170 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 PPIAL4AQ9Y536 164 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 USF3Q68DE3 2245 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 H7BYZ3 331 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 PROP1O75360 226 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 IGHV1-46P01743 117 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 CCKARP32238 428 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 OR5T1Q8NG75 326 aa11.57□□□□□ -0.56
MSH5-202ENST00000375740 TCF21O43680 179 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 CLDN14O95500 239 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 GPR12P47775 334 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 HBG1P69891 147 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 HBG2P69892 147 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 TNFAIP6P98066 277 aaPredicted RBP11.56□□□□□ -0.56
MSH5-202ENST00000375740 TMEM241Q24JQ0 296 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 TCTEX1D1Q8N7M0 179 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 GCM1Q9NP62 436 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 SH3BGRL2Q9UJC5 107 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 RAB29O14966 203 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 LINC00614P0C842 121 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 GATA4P43694 442 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 OR5I1Q13606 314 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 H2BFWTQ7Z2G1 175 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 MRGPRGQ86SM5 289 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 TGIF2LYQ8IUE0 185 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 RNF7Q9UBF6 113 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 CLN8Q9UBY8 286 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 JPT1Q9UK76 154 aa11.56□□□□□ -0.56
MSH5-202ENST00000375740 CNN1P51911 297 aaKnown RBP11.55□□□□□ -0.56
MSH5-202ENST00000375740 LOXL3P58215 753 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 TMEM14EPQ6UXP3 125 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 SPACA3Q8IXA5 215 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 OR4C12Q96R67 309 aa11.55□□□□□ -0.56
MSH5-202ENST00000375740 AURKAIP1Q9NWT8 199 aaPredicted RBP11.55□□□□□ -0.56
MSH5-202ENST00000375740 OR6C3Q9NZP0 311 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms