RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 LRP11Q86VZ4 500 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 ZNRF1Q8ND25 227 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 RBFOX2O43251 390 aaKnown RBP eCLIP12.04□□□□□ -0.482e-20■□□□□ 10.6
MSH5-201ENST00000375703 GFRA3O60609 400 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 DDTP30046 118 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 PDLIM4P50479 330 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 LOXL3P58215 753 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 CR1LQ2VPA4 569 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 BHLHA15Q7RTS1 189 aaPredicted RBP12.04□□□□□ -0.48
MSH5-201ENST00000375703 MGST2Q99735 147 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 PROCRQ9UNN8 238 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 NCOR1O75376 2440 aa12.04□□□□□ -0.48
MSH5-201ENST00000375703 ARL14EPLP0DKL9 152 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 CD99P14209 185 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 TMPRSS3P57727 454 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 LCN2P80188 198 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 STARD4Q96DR4 205 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 TMEM140Q9NV12 185 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 PRR14LQ5THK1 2151 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 A0A087X0M5 115 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 TRAV17A0A0B4J275 112 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 A0A0U1RQK1 487 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 A0A1B0GX30 115 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 PRSS46E5RG02 174 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 CYB5R2Q6BCY4 276 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 GCSAMQ8N6F7 178 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 FAM216AQ8WUB2 273 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 GGTLC1Q9BX51 225 aa12.03□□□□□ -0.48
MSH5-201ENST00000375703 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 F2RL2O00254 374 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 TNFSF13O75888 250 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 CXorf1O96002 111 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 C1QTNF9P0C862 333 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 STAG3L2P0CL84 134 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 STAG3L3P0CL85 134 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 PRSS8Q16651 343 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 MSMPQ1L6U9 139 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 REC114Q7Z4M0 266 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 TXNDC17Q9BRA2 123 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 IFI27L2Q9H2X8 130 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 NPVFQ9HCQ7 196 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 TCF19Q9Y242 345 aa12.02□□□□□ -0.48
MSH5-201ENST00000375703 AHRRA9YTQ3 701 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 IL3RAP26951 378 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 CFHR2P36980 270 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 ZNF114Q8NC26 417 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 SLC31A2O15432 143 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 KIR2DS2P43631 304 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 C1orf229Q6ZS94 237 aaPredicted RBP12.02□□□□□ -0.49
MSH5-201ENST00000375703 LEAP2Q969E1 77 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 OR2V2Q96R30 315 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 TMEM204Q9BSN7 226 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 DKK4Q9UBT3 224 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 TRAPPC1Q9Y5R8 145 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 SLC25A15Q9Y619 301 aa12.02□□□□□ -0.49
MSH5-201ENST00000375703 ZNF705GA8MUZ8 300 aaPredicted RBP12.01□□□□□ -0.49
MSH5-201ENST00000375703 CGAP01215 116 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 GCGP01275 180 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 CNN1P51911 297 aaKnown RBP12.01□□□□□ -0.49
MSH5-201ENST00000375703 FOXL1Q12952 345 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 UNQ6494/PRO21346Q6UXR6 183 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 SSMEM1Q8WWF3 244 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 TMEM18Q96B42 140 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 IMMP2LQ96T52 175 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 PTPRBP23467 1997 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 ZNF83P51522 516 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
MSH5-201ENST00000375703 MDFIC2A0A1B0GVS7 189 aa12□□□□□ -0.49
MSH5-201ENST00000375703 UTF1Q5T230 341 aa12□□□□□ -0.49
MSH5-201ENST00000375703 FAM169BQ8N8A8 192 aa12□□□□□ -0.49
MSH5-201ENST00000375703 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
MSH5-201ENST00000375703 DDB2Q92466 427 aa12□□□□□ -0.49
MSH5-201ENST00000375703 C1orf159Q96HA4 380 aa12□□□□□ -0.49
MSH5-201ENST00000375703 PRRC2CQ9Y520 2896 aaKnown RBP12□□□□□ -0.49
MSH5-201ENST00000375703 SPRY3O43610 288 aa12□□□□□ -0.49
MSH5-201ENST00000375703 RAB7AP51149 207 aa12□□□□□ -0.49
MSH5-201ENST00000375703 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
MSH5-201ENST00000375703 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
MSH5-201ENST00000375703 LSM4Q9Y4Z0 139 aaKnown RBP12□□□□□ -0.49
MSH5-201ENST00000375703 PCNX2A6NKB5 2137 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 TRBV20OR9-2A0A075B6H5 130 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 TRGV8A0A0C4DH27 118 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 SCO2A0A1W2PP80 73 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 M0R1B8 84 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 IL6RP08887 468 aaPredicted RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 CASP6P55212 293 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 ARSJQ5FYB0 599 aaPredicted RBP11.99□□□□□ -0.49
MSH5-201ENST00000375703 CT45A1Q5HYN5 189 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
MSH5-201ENST00000375703 ZNF664Q8N3J9 261 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms