RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 TTRP02766 147 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 SPTBP11277 2137 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 ERGP11308 486 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 GRB2P62993 217 aaKnown RBP7.44□□□□□ -1.22
UBR4-201ENST00000375218 HES1Q14469 280 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 LINC01555Q8NAE3 123 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 BORCS7Q96B45 105 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 AGMATQ9BSE5 352 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 EMC6Q9BV81 110 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 RPS6KB2Q9UBS0 482 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 TNFSF12O43508 249 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 P2RY8Q86VZ1 359 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 ZPLD1Q8TCW7 415 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 PARP11Q9NR21 331 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 SNX11Q9Y5W9 270 aa7.44□□□□□ -1.22
UBR4-201ENST00000375218 H7BYZ3 331 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 SYNGR1O43759 233 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 CR1LQ2VPA4 569 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
UBR4-201ENST00000375218 OR2T2Q6IF00 324 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 AKTIPQ9H8T0 292 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 RNF11Q9Y3C5 154 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 UPK1AO00322 258 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 ZNF593O00488 134 aaPredicted RBP7.43□□□□□ -1.22
UBR4-201ENST00000375218 ATP6V0CP27449 155 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 SP6Q3SY56 376 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 TTC32Q5I0X7 151 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 IGFL2Q6UWQ7 119 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 ANKRD29Q8N6D5 301 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 OR51G1Q8NGK1 321 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 FRZBQ92765 325 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 DIDO1Q9BTC0 2240 aaKnown RBP7.43□□□□□ -1.22
UBR4-201ENST00000375218 TMEM212A6NML5 194 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 C15orf61A6NNL5 157 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 WISP2O76076 250 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 NDUFC2O95298 119 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 LGALSLQ3ZCW2 172 aaPredicted RBP7.43□□□□□ -1.22
UBR4-201ENST00000375218 TMEM219Q86XT9 240 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 CMTM4Q8IZR5 234 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 FGFBP3Q8TAT2 258 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 OR10J1P30954 320 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 SSX8Q7RTT4 187 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 SAXO1Q8IYX7 474 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 SLAMF6Q96DU3 332 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 PSMG3-AS1Q96PY0 264 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 MED28Q9H204 178 aa7.43□□□□□ -1.22
UBR4-201ENST00000375218 ZNF443Q9Y2A4 671 aaPredicted RBP7.43□□□□□ -1.22
UBR4-201ENST00000375218 TSPOP30536 169 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 Q6ZS52 159 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 COX8CQ7Z4L0 72 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 MED31Q9Y3C7 131 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 TRAV19A0A0A6YYK7 116 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 C2CD4DB7Z1M9 353 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 MPPED1O15442 326 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 FAM157CP0CG43 387 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 SELENOPP49908 381 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 TPPP2P59282 170 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 PDGFRLQ15198 375 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 C1QL4Q86Z23 238 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 FTMTQ8N4E7 242 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 DNAJA3Q96EY1 480 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 ACY3Q96HD9 319 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 OR4C12Q96R67 309 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 COMMD9Q9P000 198 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 TPRKBQ9Y3C4 175 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 TMEM235A6NFC5 223 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 CA2P00918 260 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
UBR4-201ENST00000375218 LAIR2Q6ISS4 152 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 DTWD1Q8N5C7 304 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 MALSU1Q96EH3 234 aa7.42□□□□□ -1.22
UBR4-201ENST00000375218 UTP20O75691 2785 aaKnown RBP7.42□□□□□ -1.22
UBR4-201ENST00000375218 RP1P56715 2156 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 FAM236AA0A1B0GUQ0 79 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 FAM236BA0A1B0GV22 79 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 CCL21O00585 134 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 CTBP2P56545 445 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 LSM3P62310 102 aaKnown RBP7.41□□□□□ -1.22
UBR4-201ENST00000375218 RPS28P62857 69 aaKnown RBP7.41□□□□□ -1.22
UBR4-201ENST00000375218 SLC35A1P78382 337 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 SLC35E4Q6ICL7 350 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 Q6ZTK2 550 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 CCL4L1Q8NHW4 92 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 TSPAN32Q96QS1 320 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 CCDC167Q9P0B6 97 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 EML6Q6ZMW3 1958 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 NCKAP5O14513 1909 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 FNDC10F2Z333 226 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 F5H5P2 479 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 RPL36A-HNRNPH2H7BZ11 118 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 TNFAIP6P98066 277 aaPredicted RBP7.41□□□□□ -1.22
UBR4-201ENST00000375218 TGIF1Q15583 401 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 OR10D3Q8NH80 312 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 DERL3Q96Q80 235 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 LRRC61Q9BV99 259 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 AAMDCQ9H7C9 122 aa7.41□□□□□ -1.22
UBR4-201ENST00000375218 ISG20L2Q9H9L3 353 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms