RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 AMELYQ99218 206 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 PARLQ9H300 379 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 DEPPQ9NTK1 212 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 EHFQ9NZC4 300 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 F8VVB4 439 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 F8VWA3 439 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 CISD3P0C7P0 127 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FGF6P10767 208 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 CTSEP14091 401 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 PMVKQ15126 192 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 FAM27D1Q5T7N8 215 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 LYPD4Q6UWN0 246 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 RFLNAQ6ZTI6 216 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 LINC00482Q8N8I6 264 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 ZNF740Q8NDX6 193 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 CT55Q8WUE5 264 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 AJUBAQ96IF1 538 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 MLST8Q9BVC4 326 aa6.58□□□□□ -1.36
USP48-203ENST00000374732 RPL36Q9Y3U8 105 aaKnown RBP6.58□□□□□ -1.36
USP48-203ENST00000374732 NOTCH4Q99466 2003 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 SRRM4A7MD48 611 aaKnown RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 CRLF1O75462 422 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 LY6G5CQ5SRR4 150 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 STAC2Q6ZMT1 411 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 OR51E1Q8TCB6 317 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 S100A16Q96FQ6 103 aaKnown RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 SLC25A21Q9BQT8 299 aaPredicted RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 WNT10AQ9GZT5 417 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 YTHDF2Q9Y5A9 579 aaKnown RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 A0A087WWC5 75 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 GRIFINA4D1Z8 144 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 LINC01553A4QN01 128 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 RIIAD1A6NNX1 92 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 TMEM150CB9EJG8 249 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 GSTZ1O43708 216 aaPredicted RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 CA2P00918 260 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 P01737 135 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 KLK2P20151 261 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 UBE2E1P51965 193 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 HERVK_113P63121 156 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 C2orf68Q2NKX9 166 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 NOXRED1Q6NXP6 359 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 TRIM40Q6P9F5 258 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.57□□□□□ -1.36
USP48-203ENST00000374732 UBE2E3Q969T4 207 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 UBE2E2Q96LR5 201 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 SAMD10Q9BYL1 202 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 LINC00597Q9H2U6 94 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 WDR83OSQ9Y284 106 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 SPCS1Q9Y6A9 102 aa6.57□□□□□ -1.36
USP48-203ENST00000374732 CREBL2O60519 120 aaPredicted RBP6.56□□□□□ -1.36
USP48-203ENST00000374732 GPX1P07203 203 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 H2BFMP0C1H6 154 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 HILS1P60008 231 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 TSPO2Q5TGU0 170 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 Q6ZWC4 215 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 PRSS45Q7RTY3 260 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 PARP11Q9NR21 331 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 OR5V1Q9UGF6 321 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 POLR1DQ9Y2S0 133 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 TICRRQ7Z2Z1 1910 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.56□□□□□ -1.36
USP48-203ENST00000374732 DUS4LO95620 317 aaKnown RBP6.56□□□□□ -1.36
USP48-203ENST00000374732 CD8AP01732 235 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 APOHP02749 345 aaPredicted RBP6.56□□□□□ -1.36
USP48-203ENST00000374732 PPIBP23284 216 aaKnown RBP6.56□□□□□ -1.36
USP48-203ENST00000374732 KIR2DS2P43631 304 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 DPTQ07507 201 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 PLPP4Q5VZY2 271 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 LCN12Q6JVE5 192 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 C9orf139Q6ZV77 190 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 GABARAPL1Q9H0R8 117 aa6.56□□□□□ -1.36
USP48-203ENST00000374732 GNB2P62879 340 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 GAGE2EQ4V326 116 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 ZNF542PQ5EBM4 170 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 MRPL54Q6P161 138 aaKnown RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 DOK4Q8TEW6 326 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 KCNIP2Q9NS61 270 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 GAGE2DQ9UEU5 116 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 MUC22E2RYF6 1773 aaPredicted RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 HBE1P02100 147 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 MRPL3P09001 348 aaKnown RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 TPT1P13693 172 aaKnown RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 SRD5A1P18405 259 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 OPRM1P35372 400 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 YPEL3P61236 119 aaPredicted RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 HES1Q14469 280 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 DMKNQ6E0U4 476 aaPredicted RBP6.55□□□□□ -1.36
USP48-203ENST00000374732 PRSS41Q7RTY9 318 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 SH3BGRL3Q9H299 93 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 C5orf66Q9H5L9 145 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
USP48-203ENST00000374732 OOSP1A8MZH6 123 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms