RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 HSBP1O75506 76 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 APCSP02743 223 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 OR2D2Q9H210 308 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 PEF1Q9UBV8 284 aaKnown RBP10.8□□□□□ -0.68
PRPF4-201ENST00000374198 C19orf25Q9UFG5 118 aaPredicted RBP10.8□□□□□ -0.68
PRPF4-201ENST00000374198 SH3BGRL2Q9UJC5 107 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 C2orf70A6NJV1 201 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 M0R2Z0 102 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 RRHO14718 337 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 ZG16O60844 167 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 TNFSF15O95150 251 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 CXorf1O96002 111 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 CA7P43166 264 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 GFERP55789 205 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 RBPJQ06330 500 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 HLA-BQ31612 363 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 ARRDC1-AS1Q9H2J1 176 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 LRP4O75096 1905 aa10.8□□□□□ -0.68
PRPF4-201ENST00000374198 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.79□□□□□ -0.68
PRPF4-201ENST00000374198 OR10J4P0C629 311 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 FBLP22087 321 aaKnown RBP10.79□□□□□ -0.68
PRPF4-201ENST00000374198 NPY1RP25929 384 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 OTX2P32243 289 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 SSTR5P35346 364 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 LGALS7P47929 136 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 WDR74Q6RFH5 385 aaPredicted RBP10.79□□□□□ -0.68
PRPF4-201ENST00000374198 SPATA12Q7Z6I5 190 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 ABCA7Q8IZY2 2146 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 NINJ1Q92982 152 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 WDR83OSQ9Y284 106 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 OTOGLQ3ZCN5 2332 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 IGHV1OR15-9A0A0B4J2B8 117 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 LRRC30A6NM36 301 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
PRPF4-201ENST00000374198 PMS2CLQ68D20 193 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 MRPL54Q6P161 138 aaKnown RBP10.79□□□□□ -0.68
PRPF4-201ENST00000374198 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 C11orf52Q96A22 123 aa10.79□□□□□ -0.68
PRPF4-201ENST00000374198 TCL1AP56279 114 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 SLC25A34Q6PIV7 304 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 OR1B1Q8NGR6 318 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 ZDHHC16Q969W1 377 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 RARRES3Q9UL19 164 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 GJE1A6NN92 205 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 C9orf172C9J069 976 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 CD1BP29016 333 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 OR2Y1Q8NGV0 311 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 TMEM186Q96B77 213 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 VPS13AQ96RL7 3174 aa10.78□□□□□ -0.68
PRPF4-201ENST00000374198 SF3B5Q9BWJ5 86 aaKnown RBP10.78□□□□□ -0.68
PRPF4-201ENST00000374198 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.78□□□□□ -0.68
PRPF4-201ENST00000374198 IGLV3-32A0A0A0MS00 114 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 G3V3Y1 287 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 CLDN14O95500 239 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 PTGDSP41222 190 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 CCR5P51681 352 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 KRTAP27-1Q3LI81 207 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 SHISA6Q6ZSJ9 500 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 SLC25A40Q8TBP6 338 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 DEPPQ9NTK1 212 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 MTCH1Q9NZJ7 389 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 CRIM1Q9NZV1 1036 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 HS3ST3A1Q9Y663 406 aa10.77□□□□□ -0.68
PRPF4-201ENST00000374198 SEC16AO15027 2179 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 MYO15AQ9UKN7 3530 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 IGHV3-15A0A0B4J1V0 119 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 GAGE10A6NGK3 116 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 OR4C46A6NHA9 309 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 NPIPA3F8WFD2 350 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 PATE4P0C8F1 98 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 G6PCP35575 357 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 FOXL2P58012 376 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 SLAQ13239 276 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 LYSMD4Q5XG99 296 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 PET117Q6UWS5 81 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 KIR3DL3Q8N743 410 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 TMEM70Q9BUB7 260 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 LRRC61Q9BV99 259 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.69
PRPF4-201ENST00000374198 METTL7AQ9H8H3 244 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 VAMP5O95183 116 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 P0C879 139 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 FXYD3Q14802 87 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.77□□□□□ -0.69
PRPF4-201ENST00000374198 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 GP6Q9HCN6 339 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
PRPF4-201ENST00000374198 GVINP1Q7Z2Y8 2422 aa10.76□□□□□ -0.69
PRPF4-201ENST00000374198 ZNF32P17041 273 aa10.76□□□□□ -0.69
PRPF4-201ENST00000374198 GNG4P50150 75 aa10.76□□□□□ -0.69
PRPF4-201ENST00000374198 UFSP1Q6NVU6 142 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms