RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 IGHV3-21A0A0B4J1V1 117 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 FXYD3Q14802 87 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
LMX1B-202ENST00000373474 NINQ8N4C6 2090 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 A0A1W2PS18 150 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 ATP5LO75964 103 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 ARL14EPLP0DKL9 152 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 SRSF12Q8WXF0 261 aaKnown RBP12.13□□□□□ -0.47
LMX1B-202ENST00000373474 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 GEMIN7Q9H840 131 aaKnown RBP12.13□□□□□ -0.47
LMX1B-202ENST00000373474 IDI2-AS1Q9NZ38 188 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 LAMTOR2Q9Y2Q5 125 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 PRR33A8MZF0 331 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 PHLDA3Q9Y5J5 127 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 EPOPA6NHQ4 379 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 ZG16O60844 167 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 STARD6P59095 220 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 OR4C13Q8NGP0 309 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
LMX1B-202ENST00000373474 TBL2Q9Y4P3 447 aaKnown RBP12.13□□□□□ -0.47
LMX1B-202ENST00000373474 A8MXK9 166 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 BTCP35070 178 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 EFNB1P98172 346 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 C2orf68Q2NKX9 166 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 KIAA1644Q3SXP7 199 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 LCTP09848 1927 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 RPL27AP46776 148 aaKnown RBP12.12□□□□□ -0.47
LMX1B-202ENST00000373474 MMDQ15546 238 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 NEU1Q99519 415 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 PILRBQ9UKJ0 227 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 SCN10AQ9Y5Y9 1956 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 MC5RP33032 325 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 CX3CL1P78423 397 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 ZNF658BQ4V348 819 aaPredicted RBP12.12□□□□□ -0.47
LMX1B-202ENST00000373474 OR5P3Q8WZ94 311 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 JPT1Q9UK76 154 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 DNASE2BQ8WZ79 361 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 GPR82Q96P67 336 aa12.12□□□□□ -0.47
LMX1B-202ENST00000373474 A0A1W2PR77 199 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 AHRRA9YTQ3 701 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 CACNA1CQ13936 2221 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 TRAV30A0A087WSZ9 112 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 GDF9O60383 454 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 METTL26Q96S19 204 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 CALYQ9NYX4 217 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 TMEM56-RWDD3S4R434 201 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 MARCH11A6NNE9 402 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
LMX1B-202ENST00000373474 TMEM160Q9NX00 188 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 A0A1B0GW15 77 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 TGFBR3LH3BV60 316 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 ADRA2AP08913 450 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
LMX1B-202ENST00000373474 FCGR2BP31994 310 aaPredicted RBP12.11□□□□□ -0.47
LMX1B-202ENST00000373474 RPL8P62917 257 aaKnown RBP12.11□□□□□ -0.47
LMX1B-202ENST00000373474 OR4X2Q8NGF9 303 aa12.11□□□□□ -0.47
LMX1B-202ENST00000373474 TRAV8-2A0A0B4J237 113 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 ODAMA1E959 279 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 WNT9BO14905 357 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 CRYBB3P26998 211 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 GFRA1P56159 465 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 ATP5IP56385 69 aaPredicted RBP12.1□□□□□ -0.47
LMX1B-202ENST00000373474 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 TBX6O95947 436 aaPredicted RBP12.1□□□□□ -0.47
LMX1B-202ENST00000373474 GHRHP01286 108 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 ZNF257Q9Y2Q1 563 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 IGKV3D-11A0A0A0MRZ8 115 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 TRAV14DV4A0A0A6YYC5 116 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 WNT10AQ9GZT5 417 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 CBLN1P23435 193 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 CCL8P80075 99 aa12.1□□□□□ -0.47
LMX1B-202ENST00000373474 KLF14Q8TD94 323 aaPredicted RBP12.1□□□□□ -0.47
LMX1B-202ENST00000373474 J3QRE1 110 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 GPR183P32249 361 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 SSTR5P35346 364 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 HSPE1P61604 102 aaKnown RBP12.09□□□□□ -0.47
LMX1B-202ENST00000373474 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 NR2C2APQ86WQ0 139 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 SPSB2Q99619 263 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 IGKV1D-43A0A0B4J1Z2 117 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 RRHO14718 337 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 PTGDSP41222 190 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 KRTCAP3Q53RY4 240 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 SYNGR3O43761 229 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 TNFRSF19Q9NS68 423 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 TMEM50AO95807 157 aa12.09□□□□□ -0.47
LMX1B-202ENST00000373474 TM4SF20Q53R12 229 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms