RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 A0A1W2PQD3 144 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 PRR19A6NJB7 356 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 ZNF324O75467 553 aaPredicted RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 IBA57Q5T440 356 aaKnown RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 OR52M1Q8NGK5 317 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 MUC21A0A0G2JKD1 596 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 MUC21A0A140T8X8 626 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 SHISA7A6NL88 538 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 A8MWV9 139 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 CEACAM8P31997 349 aaPredicted RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 MUC21Q5SSG8 566 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 LAIR2Q6ISS4 152 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 SLC23A3Q6PIS1 610 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 B9D1Q9UPM9 204 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 GOLGB1Q14789 3259 aaKnown RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 ZNF735P0CB33 412 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 SSPNQ14714 243 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 FXYD3Q14802 87 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 ATG4DQ86TL0 474 aaPredicted RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 VSTM2AQ8TAG5 236 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 C20orf144Q9BQM9 153 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 SH2D1BO14796 132 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 EFNB2P52799 333 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 PRDX4Q13162 271 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 GCSAMLQ5JQS6 135 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 S1PR3Q99500 378 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 ZNF355PQ9NSJ1 428 aa5.68□□□□□ -1.5
CHD6-203ENST00000373233 MRM2Q9UI43 246 aaKnown RBP5.68□□□□□ -1.5
CHD6-203ENST00000373233 OR2T8A6NH00 312 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 C3orf80F5H4A9 247 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 VDAC1P21796 283 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 RPL11P62913 178 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 ERHP84090 104 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 OR8B8Q15620 311 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 TMEM178AQ8NBL3 297 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 IMMP2LQ96T52 175 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 LGALS3P17931 250 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 CCL11P51671 97 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 DMRTC1Q5HYR2 192 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 CYP2G1PQ6ZSU1 146 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 C5orf17Q8NAS9 161 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 ARHGAP32A7KAX9 2087 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 A0A1W2PQM1 296 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 A8MWL6 223 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 M0R135 149 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 CDIPTO14735 213 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 ZNF799Q96GE5 643 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 BDP1A6H8Y1 2624 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 DSCR4P56555 118 aaPredicted RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 HOGA1Q86XE5 327 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 SLC25A38Q96DW6 304 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 WFDC6Q9BQY6 131 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 MRPS16Q9Y3D3 137 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 SETD2Q9BYW2 2564 aaPredicted RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 ATP5LO75964 103 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 NGFRP08138 427 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 LIMS1P48059 325 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 POM121L2Q96KW2 1035 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 GPR27Q9NS67 375 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 PTPRQQ9UMZ3 2332 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 MRPL33O75394 65 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 FER1L6-AS1Q8NA97 138 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 MS4A5Q9H3V2 200 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 RNF122Q9H9V4 155 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 TRAV8-6A0A0B4J262 113 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 CRYBA2P53672 197 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 CBLN3Q6UW01 205 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 C20orf196Q8IYI0 205 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 HSD17B10Q99714 261 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 KLF12Q9Y4X4 402 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 J3KT08 172 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 KIR3DS1Q14943 382 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 WFDC8Q8IUA0 241 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 TTC9CQ8N5M4 171 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 GNRHR2Q96P88 292 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 KLF13Q9Y2Y9 288 aaPredicted RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 ORM1P02763 201 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 SRP19P09132 144 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 GGTLC2Q14390 218 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 OSR2Q8N2R0 312 aa5.67□□□□□ -1.5
CHD6-203ENST00000373233 RNASEH2CQ8TDP1 164 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 SNRNP40Q96DI7 357 aaKnown RBP5.67□□□□□ -1.5
CHD6-203ENST00000373233 RNPS1Q15287 305 aaKnown RBP5.66□□□□□ -1.5
CHD6-203ENST00000373233 CNEP1R1Q8N9A8 125 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 OR4D5Q8NGN0 318 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 SLC25A28Q96A46 364 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 ZNF391Q9UJN7 358 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 K7EP34 96 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 ZNF883P0CG24 379 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 MPV17L2Q567V2 206 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 CLDND2Q8NHS1 167 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 EMC6Q9BV81 110 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 TSSC4Q9Y5U2 329 aaPredicted RBP5.66□□□□□ -1.5
CHD6-203ENST00000373233 ZFHX2Q9C0A1 2572 aaPredicted RBP5.66□□□□□ -1.5
CHD6-203ENST00000373233 TRAV9-1A0A075B6T8 112 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 TGFBR3LH3BV60 316 aa5.66□□□□□ -1.5
CHD6-203ENST00000373233 FSTP19883 344 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms