RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 GCGP01275 180 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 HOXB1P14653 301 aaPredicted RBP7.26□□□□□ -1.25
ABCA4-201ENST00000370225 EGR4Q05215 589 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 APCDD1LQ8NCL9 501 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 LINC01587Q99440 93 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 CA2P00918 260 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 TMEM252Q8N6L7 170 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF418Q8TF45 676 aaPredicted RBP7.26□□□□□ -1.25
ABCA4-201ENST00000370225 MRAP2Q96G30 205 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 F11RQ9Y624 299 aaKnown RBP7.26□□□□□ -1.25
ABCA4-201ENST00000370225 B4DEV8 164 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 DRAM1Q8N682 238 aa7.26□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF646O15015 1829 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 C7orf71A4D174 169 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 DIRC3C9JPN6 131 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 M0R381 172 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 C1orf162Q8NEQ5 155 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 NEU4Q8WWR8 484 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 GALNT14Q96FL9 552 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 BRCA1P38398 1863 aaKnown RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SEC16AO15027 2179 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 LGALS3P17931 250 aaKnown RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 GLRXP35754 106 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 NUTF2P61970 127 aaKnown RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SELENOTP62341 195 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 TAF15Q92804 592 aaKnown RBP eCLIP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF837Q96EG3 531 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 TRBV5-5A0A0J9YX44 114 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 ACAA1P09110 424 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SRD5A1P18405 259 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 P2RY4P51582 365 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 C3orf36Q3SXR2 165 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 VAX1Q5SQQ9 334 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 AQP3Q92482 292 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 TNFSF18Q9UNG2 199 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 TCF19Q9Y242 345 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 H1FOOQ8IZA3 346 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 OR51G1Q8NGK1 321 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 MAP1LC3AQ9H492 121 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 GEMIN7Q9H840 131 aaKnown RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 IGKV1D-43A0A0B4J1Z2 117 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SIAH2O43255 324 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 UMODP07911 640 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 SCGB1A1P11684 91 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 ASPHD2Q6ICH7 369 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 ARHGEF17Q96PE2 2063 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 M0R143 59 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 RRHO14718 337 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 GCM2O75603 506 aaPredicted RBP7.25□□□□□ -1.25
ABCA4-201ENST00000370225 ARPC1AQ92747 370 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 WDYHV1Q96HA8 205 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 Q96M66 194 aa7.25□□□□□ -1.25
ABCA4-201ENST00000370225 NPIPB8E9PQR5 432 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 ICAM4Q14773 271 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 RIPPLY2Q5TAB7 128 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 BEX4Q9NWD9 120 aaPredicted RBP7.24□□□□□ -1.25
ABCA4-201ENST00000370225 THADAQ6YHU6 1953 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 IGKV3D-20A0A0C4DH25 116 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 EFEMP2O95967 443 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 HLA-DQB1P01920 261 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF383Q8NA42 475 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 IFT22Q9H7X7 185 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 SEC11BP0C7V7 166 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 GNLYP22749 145 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 DEFB121Q5J5C9 76 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 DPM3Q9P2X0 92 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 TCRBV4S1A1TA0A5B7 111 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 TGFBR3LH3BV60 316 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 CXCL2P19875 107 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 LHX2P50458 406 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF146Q15072 292 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 KIAA1644Q3SXP7 199 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 C1QTNF12Q5T7M4 302 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 C1QL2Q7Z5L3 287 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 MRPL20Q9BYC9 149 aaKnown RBP7.24□□□□□ -1.25
ABCA4-201ENST00000370225 TET1Q8NFU7 2136 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 TRGV2A0A075B6R0 118 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 A6NDN8 102 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 MUC1P15941 1255 aaPredicted RBP7.24□□□□□ -1.25
ABCA4-201ENST00000370225 CCL3L1P16619 93 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 OR4A47Q6IF82 309 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 LINC00527Q9UJ94 153 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 C8orf88P0DMB2 117 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 CTHRC1Q96CG8 243 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 MRPS18AQ9NVS2 196 aaKnown RBP7.24□□□□□ -1.25
ABCA4-201ENST00000370225 LRRC37AA6NMS7 1700 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 SCN5AQ14524 2016 aa7.24□□□□□ -1.25
ABCA4-201ENST00000370225 ZNF708P17019 499 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 SERF2P84101 59 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 OR13A1Q8NGR1 328 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 RNASE6Q93091 150 aaKnown RBP7.23□□□□□ -1.25
ABCA4-201ENST00000370225 TP53RKQ96S44 253 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 NABP2Q9BQ15 211 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 ATG101Q9BSB4 218 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 RBM38Q9H0Z9 239 aaKnown RBP7.23□□□□□ -1.25
ABCA4-201ENST00000370225 PTPRFP10586 1907 aa7.23□□□□□ -1.25
ABCA4-201ENST00000370225 IGHMP01871 453 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms