RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PGLYRP3Q96LB9 341 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR4F4Q96R69 305 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PELI2Q9HAT8 420 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 WDR83OSQ9Y284 106 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 XIRP2A4UGR9 3374 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ACACAQ13085 2346 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 A0A0G2JLM5 398 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SRRM4A7MD48 611 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 CEACAM18A8MTB9 384 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 STK17BO94768 372 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 Q0VG73 95 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 CDSNQ15517 529 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR4N5Q8IXE1 308 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM86BQ8N661 226 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 GJC3Q8NFK1 279 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR51T1Q8NGJ9 327 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR51G1Q8NGK1 321 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SLC25A43Q8WUT9 341 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 GMPPAQ96IJ6 420 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 DNAJC30Q96LL9 226 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ZFAND3Q9H8U3 227 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 MBNL3Q9NUK0 354 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 IDI2-AS1Q9NZ38 188 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 IGHV1OR21-1A0A087WYE8 117 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 hADV38S2A0JD32 116 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 C17orf112F2Z3M2 114 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 K7EP34 96 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 GCM2O75603 506 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 HRASP01112 189 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 IGLV3-25P01717 112 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ELANEP08246 267 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 LINC00869P0C866 280 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 IRF1P10914 325 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 RPL38P63173 70 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM97Q5BJF2 176 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 RPL7L1Q6DKI1 246 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 Q6ZWC4 215 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM37Q8WXS4 190 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 STARD4Q96DR4 205 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 C2orf50Q96LR7 162 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OXGR1Q96P68 337 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 RTBDNQ9BSG5 229 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM126AQ9H061 195 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 RERGLQ9H628 205 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF665Q9H7R5 613 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 KCNIP1Q9NZI2 227 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PLA2G2EQ9NZK7 142 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR1A2Q9Y585 309 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 WDR87Q6ZQQ6 2873 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 M0R1X1 148 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 RHODO00212 210 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PSPNO60542 156 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 RPL13AP40429 203 aaKnown RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PSG9Q00887 426 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 FMODQ06828 376 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 AMMECR1LQ6DCA0 310 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CD164L2Q6UWJ8 174 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 SLC35F2Q8IXU6 374 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 Q8N976 141 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 APCDD1LQ8NCL9 501 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 SCGB3A2Q96PL1 93 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 DERL1Q9BUN8 251 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 C19orf24Q9BVV8 132 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 NPFFR1Q9GZQ6 430 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM133Q9H2Q1 129 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 C1RLQ9NZP8 487 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 NCOA6Q14686 2063 aaPredicted RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 H0YIZ8 118 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 TAPBPO15533 448 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 MLNRO43193 412 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CRLF1O75462 422 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CPMP14384 443 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PVRP15151 417 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 NTF3P20783 257 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 HIST1H1TP22492 207 aaPredicted RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CDK2P24941 298 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PRDX3P30048 256 aaKnown RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PRSS3P35030 304 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 LEPP41159 167 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 SRYQ05066 204 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 ICAM4Q14773 271 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 CDK5R1Q15078 307 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 TIGITQ495A1 244 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 RNASE12Q5GAN4 147 aaKnown RBP4.22□□□□□ -1.73
UBE3D-202ENST00000369746 TRNP1Q6NT89 227 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF615Q8N8J6 731 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF709Q8N972 641 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 OR2T33Q8NG76 320 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 SYNPRQ8TBG9 265 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 GPR21Q99679 349 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 GFI1Q99684 422 aa4.22□□□□□ -1.73
UBE3D-202ENST00000369746 PXMP4Q9Y6I8 212 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms