RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CDIP1Q9H305 208 aa7.11□□□□□ -1.27
SNX27-201ENST00000368838 HEXA-AS1Q9H8Q6 139 aa7.11□□□□□ -1.27
SNX27-201ENST00000368838 NSG2Q9Y328 171 aa7.11□□□□□ -1.27
SNX27-201ENST00000368838 AMMECR1Q9Y4X0 333 aaPredicted RBP7.11□□□□□ -1.27
SNX27-201ENST00000368838 U3KQE9 123 aa7.11□□□□□ -1.27
SNX27-201ENST00000368838 TRRAPQ9Y4A5 3859 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 SAA2-SAA4A0A096LPE2 208 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 IGHV3-43A0A0B4J1X8 118 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 C13orf42A0A1B0GVH6 325 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 TMEM89A2RUT3 159 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 MPTX1A8MV57 137 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 C22orf46C9J442 243 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 H0YIZ8 118 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 LY6LH3BQJ8 138 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 CCSO14618 274 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 KCNAB3O43448 404 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 IGKV1-5P01602 117 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 MBPP02686 304 aaPredicted RBP7.1□□□□□ -1.27
SNX27-201ENST00000368838 SAA2P0DJI9 122 aaPredicted RBP7.1□□□□□ -1.27
SNX27-201ENST00000368838 IGHV3-43DP0DP04 118 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 NQO2P16083 231 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 CCL3L1P16619 93 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 CXCL2P19875 107 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 LPAR6P43657 344 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 NKX2-1P43699 371 aaPredicted RBP7.1□□□□□ -1.27
SNX27-201ENST00000368838 RAB32Q13637 225 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 SMCO1Q147U7 214 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 HLA-DRB5Q30154 266 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 MIDNQ504T8 468 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 NCR3LG1Q68D85 454 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 ZNF767PQ75MW2 155 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 PDPNQ86YL7 162 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 PUSL1Q8N0Z8 303 aaKnown RBP7.1□□□□□ -1.27
SNX27-201ENST00000368838 ABHD12Q8N2K0 398 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 H1FXQ92522 213 aaKnown RBP7.1□□□□□ -1.27
SNX27-201ENST00000368838 RAB40CQ96S21 281 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 CHIAQ9BZP6 476 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 MFFQ9GZY8 342 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 HSPB7Q9UBY9 170 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 HSPB11Q9Y547 144 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 WSB1Q9Y6I7 421 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 MEGF8Q7Z7M0 2845 aa7.1□□□□□ -1.27
SNX27-201ENST00000368838 IGHV2-26A0A0B4J1V2 119 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 ODF3BA8MYP8 253 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 INS-IGF2F8WCM5 200 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 SMLR1H3BR10 107 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 J3QLI3 93 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 K7EPK0 472 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 L7N2F9 121 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 SLC31A2O15432 143 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 MED6O75586 246 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 HRASP01112 189 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 FSHBP01225 129 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 GAPDHP04406 335 aaKnown RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 CT45A6P0DMU7 189 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 CT45A5P0DMU8 189 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 CT45A7P0DMV0 189 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 PVALBP20472 110 aaPredicted RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 OMGP23515 440 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 GATA3P23771 443 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 LGALS7P47929 136 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 RAB13P51153 203 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 UBA52P62987 128 aaKnown RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 IFITM2Q01629 132 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 BAXQ07812 192 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 MINOS1Q5TGZ0 78 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 PRAMEF5Q5TYX0 476 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 STPG2Q8N412 459 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 Q8N7P7 452 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 INO80EQ8NBZ0 244 aaPredicted RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 DMBX1Q8NFW5 382 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 OR13D1Q8NGV5 346 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 OR4A5Q8NH83 315 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 GRPEL2Q8TAA5 225 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 STOML3Q8TAV4 291 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 TCTEX1D2Q8WW35 142 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 GPR146Q96CH1 333 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 PHYHIPLQ96FC7 376 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 ZNF48Q96MX3 618 aaPredicted RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 JMJD8Q96S16 334 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 CLEC7AQ9BXN2 247 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 SIRPDQ9H106 197 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.09□□□□□ -1.27
SNX27-201ENST00000368838 BET1LQ9NYM9 111 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 MBD2Q9UBB5 411 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 RNF150Q9ULK6 438 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 MINOS1-NBL1R4GNA1 71 aa7.09□□□□□ -1.27
SNX27-201ENST00000368838 TGP01266 2768 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 IGHV2-70DA0A0C4DH43 119 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 DNAJC9-AS1A6NH13 148 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 MARCH11A6NNE9 402 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 FAM25EA8MYX2 175 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 J3KRW8 73 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 M0R1X1 148 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 ARPC5O15511 151 aa7.08□□□□□ -1.28
SNX27-201ENST00000368838 TNFSF12O43508 249 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms