RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 RNASE12Q5GAN4 147 aaKnown RBP14.43□□□□□ -0.1
CHTOP-202ENST00000368687 SAMD5Q5TGI4 173 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 IDO2Q6ZQW0 420 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 PUSL1Q8N0Z8 303 aaKnown RBP14.43□□□□□ -0.1
CHTOP-202ENST00000368687 LINC00482Q8N8I6 264 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 SRSF12Q8WXF0 261 aaKnown RBP14.43□□□□□ -0.1
CHTOP-202ENST00000368687 P2RX4Q99571 388 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 RSRP1Q9BUV0 290 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 NDUFA13Q9P0J0 144 aa14.43□□□□□ -0.1
CHTOP-202ENST00000368687 A0A0G2JLM5 398 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 MPPED1O15442 326 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 GSTZ1O43708 216 aaPredicted RBP14.42□□□□□ -0.1
CHTOP-202ENST00000368687 SOX15O60248 233 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 RAMP3O60896 148 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 RLN1P04808 185 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 SSBP2P81877 361 aaPredicted RBP14.42□□□□□ -0.1
CHTOP-202ENST00000368687 DGCR2P98153 550 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 STEAP1BQ6NZ63 245 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 ETV3LQ6ZN32 361 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 LCNL1Q6ZST4 164 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 SLC25A42Q86VD7 318 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 MRPL41Q8IXM3 137 aaKnown RBP14.42□□□□□ -0.1
CHTOP-202ENST00000368687 CADM3Q8N126 398 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 DGCR14Q96DF8 476 aaKnown RBP14.42□□□□□ -0.1
CHTOP-202ENST00000368687 KLK15Q9H2R5 256 aa14.42□□□□□ -0.1
CHTOP-202ENST00000368687 FABP12A6NFH5 140 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 M0QYG6 137 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 RAB3DO95716 219 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 OR8U8P0C7N1 319 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 TPPP2P59282 170 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 RPL8P62917 257 aaKnown RBP14.41□□□□□ -0.1
CHTOP-202ENST00000368687 MRGPRG-AS1Q2M3A8 158 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 KPRPQ5T749 579 aaPredicted RBP14.41□□□□□ -0.1
CHTOP-202ENST00000368687 LHFPL1Q86WI0 220 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 RAX2Q96IS3 184 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 GPHA2Q96T91 129 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 ZNF355PQ9NSJ1 428 aa14.41□□□□□ -0.1
CHTOP-202ENST00000368687 MSGN1A6NI15 193 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 I3L521 148 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 TNFSF8P32971 234 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 FHL3Q13643 280 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 KIAA0141Q14154 515 aaPredicted RBP14.4□□□□□ -0.1
CHTOP-202ENST00000368687 OR4A47Q6IF82 309 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 C18orf65Q6ZTR6 163 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 VKORC1L1Q8N0U8 176 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 DMBX1Q8NFW5 382 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 TERB2Q8NHR7 220 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 ZFAND1Q8TCF1 268 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 DPF1Q92782 380 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 TINAGL1Q9GZM7 467 aaPredicted RBP14.4□□□□□ -0.1
CHTOP-202ENST00000368687 HRASLSQ9HDD0 168 aa14.4□□□□□ -0.1
CHTOP-202ENST00000368687 ZMAT5Q9UDW3 170 aaKnown RBP14.4□□□□□ -0.1
CHTOP-202ENST00000368687 DISC1C4P0D8 188 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 TRGV3P03979 118 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 LGALS1P09382 135 aaKnown RBP14.39□□□□□ -0.11
CHTOP-202ENST00000368687 OR9G9P0C7N8 305 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 AKAIN1P0CW23 69 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 PGAM2P15259 253 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 HLA-GP17693 338 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 PTBP1P26599 531 aaKnown RBP eCLIP14.39□□□□□ -0.11
CHTOP-202ENST00000368687 RND3P61587 244 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 ZNF616Q08AN1 781 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 PHLDA2Q53GA4 152 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 THOC7Q6I9Y2 204 aaKnown RBP14.39□□□□□ -0.11
CHTOP-202ENST00000368687 REC114Q7Z4M0 266 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 USMG5Q96IX5 58 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 SLC2A9Q9NRM0 540 aa14.39□□□□□ -0.11
CHTOP-202ENST00000368687 C13orf42A0A1B0GVH6 325 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 MARCH11A6NNE9 402 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 G3V4G9 280 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 B3GALNT1O75752 331 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 S1PR2O95136 353 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 DHFRP00374 187 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 RPA2P15927 270 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 RPL27AP46776 148 aaKnown RBP14.38□□□□□ -0.11
CHTOP-202ENST00000368687 SURF2Q15527 256 aaPredicted RBP14.38□□□□□ -0.11
CHTOP-202ENST00000368687 BEAN1Q3B7T3 259 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 FAM209BQ5JX69 171 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 SSX9Q7RTT3 188 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 CCDC71LQ8N9Z2 235 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 OR5T1Q8NG75 326 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 OR11H1Q8NG94 326 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 OR1N2Q8NGR9 330 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 PRRT1Q99946 306 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 SOSTQ9BQB4 213 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 SRSF8Q9BRL6 282 aaKnown RBP14.38□□□□□ -0.11
CHTOP-202ENST00000368687 GNB4Q9HAV0 340 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 TMEM140Q9NV12 185 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 COA4Q9NYJ1 87 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 ZNF257Q9Y2Q1 563 aa14.38□□□□□ -0.11
CHTOP-202ENST00000368687 DPPA5A6NC42 116 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 AP3S2P59780 193 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 DEFB136Q30KP8 78 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 SCGB2B2Q4G0G5 96 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 PDLIM3Q53GG5 364 aaPredicted RBP14.37□□□□□ -0.11
CHTOP-202ENST00000368687 ASPHD1Q5U4P2 390 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 TBC1D26Q86UD7 250 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 C1QL4Q86Z23 238 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 TTC9CQ8N5M4 171 aa14.37□□□□□ -0.11
CHTOP-202ENST00000368687 ADAD2Q8NCV1 583 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms