RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 PRSS48Q7RTY5 328 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 LAX1Q8IWV1 398 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 VKORC1L1Q8N0U8 176 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 NECAP1Q8NC96 275 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 FYTTD1Q96QD9 318 aaKnown RBP7.8□□□□□ -1.16
CLRN3-201ENST00000368671 ST6GALNAC5Q9BVH7 336 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 MRPS7Q9Y2R9 242 aaKnown RBP7.8□□□□□ -1.16
CLRN3-201ENST00000368671 PRELID3BQ9Y3B1 194 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 S4R3C0 116 aa7.8□□□□□ -1.16
CLRN3-201ENST00000368671 TRAV1-2A0A0B4J238 106 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 SMIM30A4D0T7 59 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 DPPA5A6NC42 116 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 GGCTO75223 188 aaKnown RBP7.79□□□□□ -1.16
CLRN3-201ENST00000368671 OR2C1O95371 312 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 FOLR2P14207 255 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 CD36P16671 472 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 RAB3BP20337 219 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 NFYAP23511 347 aaPredicted RBP7.79□□□□□ -1.16
CLRN3-201ENST00000368671 CRHBPP24387 322 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 KIR2DS2P43631 304 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 RPL30P62888 115 aaKnown RBP7.79□□□□□ -1.16
CLRN3-201ENST00000368671 Q6ZS49 121 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF367Q7RTV3 350 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 SLC25A42Q86VD7 318 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 NRG4Q8WWG1 115 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 CACNG8Q8WXS5 425 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 CENPOQ9BU64 300 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 OR51E2Q9H255 320 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 FBXL7Q9UJT9 491 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 ZNF257Q9Y2Q1 563 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 RBMX2Q9Y388 322 aaKnown RBP7.79□□□□□ -1.16
CLRN3-201ENST00000368671 DMRT1Q9Y5R6 373 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 DNAH1Q9P2D7 4330 aa7.79□□□□□ -1.16
CLRN3-201ENST00000368671 LYSTQ99698 3801 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 ERICH4A6NGS2 130 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 TEX22C9J3V5 150 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 NDUFB8O95169 186 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 DTYMKP23919 212 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 ARL3P36405 182 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 RPL27AP46776 148 aaKnown RBP7.78□□□□□ -1.16
CLRN3-201ENST00000368671 ARL6IP1Q15041 203 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 TBCEQ15813 527 aaPredicted RBP7.78□□□□□ -1.16
CLRN3-201ENST00000368671 CDNFQ49AH0 187 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 FAM209BQ5JX69 171 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 CLEC19AQ6UXS0 136 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 TCTEX1D2Q8WW35 142 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 OR2A7Q96R45 310 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 ZC4H2Q9NQZ6 224 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 TECRQ9NZ01 308 aaKnown RBP7.78□□□□□ -1.16
CLRN3-201ENST00000368671 SPATA2Q9UM82 520 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 OR2W1Q9Y3N9 320 aa7.78□□□□□ -1.16
CLRN3-201ENST00000368671 IGKV1D-13A0A0B4J2D9 117 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 ZNF320A2RRD8 509 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 NPIPB5A8MRT5 1133 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 E7EUB6 86 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 LGALS9O00182 355 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 KBTBD11O94819 623 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 IGLV2-14P01704 120 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 HLA-DQB1P01920 261 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 REG1AP05451 166 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 IL6RP08887 468 aaPredicted RBP7.77□□□□□ -1.17
CLRN3-201ENST00000368671 CTXN2P0C2S0 81 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 IGKV1-13P0DP09 117 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 MYOD1P15172 320 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 CBLN1P23435 193 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 C22orf42Q6IC83 251 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 SSX9Q7RTT3 188 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 SLC16A13Q7RTY0 426 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 NR2C2APQ86WQ0 139 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 MFSD4AQ8N468 514 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 OR4S2Q8NH73 311 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 VSTM2AQ8TAG5 236 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 TMEM167AQ8TBQ9 72 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 NUDCD2Q8WVJ2 157 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 EEF1AKMT3Q96AZ1 226 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 CCDC140Q96MF4 163 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 NDUFB11Q9NX14 153 aa7.77□□□□□ -1.17
CLRN3-201ENST00000368671 A0A1B0GW64 132 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 TRDV1A0A1B0GX56 115 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 TMEM235A6NFC5 223 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 SLC22A5O76082 557 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 SCAF4O95104 1147 aaKnown RBP7.76□□□□□ -1.17
CLRN3-201ENST00000368671 ZNF735P0CB33 412 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 AREGP15514 252 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 VAMP1P23763 118 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 GNG2P59768 71 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 HACD4Q5VWC8 232 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 ZNF57Q68EA5 555 aaPredicted RBP7.76□□□□□ -1.17
CLRN3-201ENST00000368671 CNIH2Q6PI25 160 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 GPHB5Q86YW7 130 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 TMEM61Q8N0U2 210 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 PUSL1Q8N0Z8 303 aaKnown RBP7.76□□□□□ -1.17
CLRN3-201ENST00000368671 OR52B4Q8NGK2 314 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 CNBD2Q96M20 576 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 GPHA2Q96T91 129 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 HSD17B10Q99714 261 aaKnown RBP7.76□□□□□ -1.17
CLRN3-201ENST00000368671 SLC2A9Q9NRM0 540 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 TAS2R8Q9NYW2 309 aa7.76□□□□□ -1.17
CLRN3-201ENST00000368671 MLXQ9UH92 298 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms