RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 C7orf69Q9H7B7 122 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 COL4A1P02462 1669 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 C7orf66A4D0T2 115 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 NPFFO15130 113 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 CTDSPLO15194 276 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 IGKV1D-16P01601 117 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 GAPDHP04406 335 aaKnown RBP6.1□□□□□ -1.43
SPTA1-201ENST00000368147 C1orf162Q8NEQ5 155 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-201ENST00000368147 OR4A5Q8NH83 315 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 GATA6Q92908 595 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 A0A1W2PPV9 198 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 ATP5LO75964 103 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 CELA3AP09093 270 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 ATP6V0CP27449 155 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 LRRC75BQ2VPJ9 315 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 WFDC12Q8WWY7 111 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 GPHA2Q96T91 129 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 HSPB9Q9BQS6 159 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 TXNDC17Q9BRA2 123 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 G6PC2Q9NQR9 355 aa6.1□□□□□ -1.43
SPTA1-201ENST00000368147 HIST1H4AP62805 103 aaKnown RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 BHLHA9Q7RTU4 235 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 MARVELD3Q96A59 401 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 NRXN2Q9P2S2 1712 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 J3QR06 171 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 COX6A1P12074 109 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SRD5A1P18405 259 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SLC25A1P53007 311 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 ATXN8Q156A1 80 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 TMEM78Q5T7P6 136 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 MORN3Q6PF18 240 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 TMEM86BQ8N661 226 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 OR5AN1Q8NGI8 311 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 FRRS1LQ9P0K9 344 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 IGHV3OR16-8A0A075B7F1 116 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 ZFPL1O95159 310 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 HIGD1AQ9Y241 93 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 H3BTX0 84 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SYNGR1O43759 233 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SPNP16150 400 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 PSG4Q00888 419 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 C3orf36Q3SXR2 165 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 PPP1R32Q7Z5V6 425 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 OR2C3Q8N628 320 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 ADAD2Q8NCV1 583 aaKnown RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 GDF15Q99988 308 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 TMEFF2Q9UIK5 374 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SLC17A2O00624 439 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SIGLEC5O15389 551 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 PLNP26678 52 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 VDAC2P45880 294 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SSBP2P81877 361 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 FAM201AQ5SY85 155 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 SPACA3Q8IXA5 215 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 OR52M1Q8NGK5 317 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 NEU1Q99519 415 aa6.09□□□□□ -1.43
SPTA1-201ENST00000368147 NCOA6Q14686 2063 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-201ENST00000368147 C9orf170A2RU37 121 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 LINC00587B1AMM8 73 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.09□□□□□ -1.44
SPTA1-201ENST00000368147 RRHO14718 337 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 FOXS1O43638 330 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 TSPOP30536 169 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.44
SPTA1-201ENST00000368147 ASPDHA6ND91 283 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 LEUTXA8MZ59 168 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 NCMAPQ5T1S8 102 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ABHD12Q8N2K0 398 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 C10orf111Q8N326 155 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ZNF48Q96MX3 618 aaPredicted RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 SF3B5Q9BWJ5 86 aaKnown RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 DMRT1Q9Y5R6 373 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 IGLV3-16A0A075B6K0 115 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 CXorf51AA0A1B0GTR3 108 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 SUMO4Q6EEV6 95 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 PRSS54Q6PEW0 395 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 OR4D11Q8NGI4 311 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 TCRBV16S1A1N1A0A5B0 115 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 TCRBV4S1A1TA0A5B7 111 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 CXorf65A6NEN9 183 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ZIC3O60481 467 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 F12P00748 615 aaPredicted RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ISL1P61371 349 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 PPP1R1AQ13522 171 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 SRSF7Q16629 238 aaKnown RBP eCLIP6.08□□□□□ -1.443e-8■■■□□ 15.2
SPTA1-201ENST00000368147 SP7Q8TDD2 431 aaPredicted RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 C5orf30Q96GV9 206 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 GP6Q9HCN6 339 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 CTAG2O75638 210 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 AWAT1Q58HT5 328 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 DNM1P46Q6ZS02 220 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 SYS1Q8N2H4 156 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 RAX2Q96IS3 184 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 WNK1Q9H4A3 2382 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 CENPVL1A0A0U1RR11 272 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 MFAP2P55001 183 aa6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ZNF385CQ66K41 422 aaPredicted RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 ATG4DQ86TL0 474 aaPredicted RBP6.08□□□□□ -1.44
SPTA1-201ENST00000368147 CADM3Q8N126 398 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms