RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 OR52E5Q8NH55 327 aa8.93□□□□□ -0.98
H3F3A-202ENST00000366814 DDB2Q92466 427 aa8.93□□□□□ -0.98
H3F3A-202ENST00000366814 NKX6-2Q9C056 277 aaPredicted RBP8.93□□□□□ -0.98
H3F3A-202ENST00000366814 HIPK2Q9H2X6 1198 aa8.93□□□□□ -0.98
H3F3A-202ENST00000366814 CARHSP1Q9Y2V2 147 aaKnown RBP8.93□□□□□ -0.98
H3F3A-202ENST00000366814 HRNRQ86YZ3 2850 aaPredicted RBP8.92□□□□□ -0.98
H3F3A-202ENST00000366814 A0A1W2PPR1 153 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 PLAUP00749 431 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 SFTA3P0C7M3 94 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 FHITP49789 147 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 PPOXP50336 477 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 LINC00205P59089 165 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 SRSF3P84103 164 aaKnown RBP8.92□□□□□ -0.98
H3F3A-202ENST00000366814 BTN1A1Q13410 526 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 ZNF273Q14593 569 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 LRRC75BQ2VPJ9 315 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 AARDQ4LEZ3 155 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 C10orf91Q5T1B1 145 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 FOXC2Q99958 501 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 QTRT1Q9BXR0 403 aaKnown RBP8.92□□□□□ -0.98
H3F3A-202ENST00000366814 SMDT1Q9H4I9 107 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 UBTD1Q9HAC8 227 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 TMEM140Q9NV12 185 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 FBXO7Q9Y3I1 522 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 KPTNQ9Y664 436 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 USF3Q68DE3 2245 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 OTOGQ6ZRI0 2925 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 F8P00451 2351 aa8.92□□□□□ -0.98
H3F3A-202ENST00000366814 TRBV23-1A0A0A0MS06 115 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 UBE2L5PA0A1B0GUS4 154 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 A0A1W2PPH5 198 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 DVL1O14640 695 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 APOA2P02652 100 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 OR9G9P0C7N8 305 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 OR2B8PP59922 312 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 TMEM200BQ69YZ2 307 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 SPNS3Q6ZMD2 512 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 RBMXL1Q96E39 390 aaKnown RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 WDR61Q9GZS3 305 aaKnown RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 RAB1BQ9H0U4 201 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 TIMM9Q9Y5J7 89 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 TNFRSF13BO14836 293 aaPredicted RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 PPIHO43447 177 aaKnown RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 FSTL3O95633 263 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 DEFB113Q30KQ7 82 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 FAM71F2Q6NXP2 309 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 LYPD2Q6UXB3 125 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 HAPLN4Q86UW8 402 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 ZNF429Q86V71 674 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 TAF15Q92804 592 aaKnown RBP eCLIP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 RHOVQ96L33 236 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 OR4C12Q96R67 309 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 ZNF251Q9BRH9 671 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 MS4A7Q9GZW8 240 aaPredicted RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 ENY2Q9NPA8 101 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 HEYLQ9NQ87 328 aaPredicted RBP8.91□□□□□ -0.98
H3F3A-202ENST00000366814 SLC35D1Q9NTN3 355 aa8.91□□□□□ -0.98
H3F3A-202ENST00000366814 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.98
H3F3A-202ENST00000366814 A0A1B0GW64 132 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 MMP23AO75900 390 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 CCL3L1P16619 93 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 HOXA1P49639 335 aaPredicted RBP8.9□□□□□ -0.98
H3F3A-202ENST00000366814 RAB11AP62491 216 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 GNB2P62879 340 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 PDLIM3Q53GG5 364 aaPredicted RBP8.9□□□□□ -0.98
H3F3A-202ENST00000366814 ZNF709Q8N972 641 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 C8orf31Q8N9H6 132 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 ZNF383Q8NA42 475 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 OR10X1Q8NGY0 326 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 MBD6Q96DN6 1003 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 TMEM204Q9BSN7 226 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 RSG1Q9BU20 258 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 KIAA1456Q9P272 454 aa8.9□□□□□ -0.98
H3F3A-202ENST00000366814 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 C15orf61A6NNL5 157 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 C17orf112F2Z3M2 114 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 IFNA10P01566 189 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 MBP02144 154 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 IL3RAP26951 378 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 LOXP28300 417 aaPredicted RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 PPT1P50897 306 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 ZNF833PQ6ZTB9 187 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 SFT2D1Q8WV19 159 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 UNKLQ9H9P5 680 aaKnown RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 CBLN4Q9NTU7 201 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 PRNDQ9UKY0 176 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 FOXA2Q9Y261 457 aaPredicted RBP8.89□□□□□ -0.99
H3F3A-202ENST00000366814 A0A1B0GV50 99 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 SOX15O60248 233 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 TMEM41BQ5BJD5 291 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 SPINK9Q5DT21 86 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 OR4A47Q6IF82 309 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 VKORC1L1Q8N0U8 176 aa8.89□□□□□ -0.99
H3F3A-202ENST00000366814 PUSL1Q8N0Z8 303 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms