RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 IGFBP3P17936 291 aaPredicted RBP17.85■□□□□ 0.45
SMURF1-201ENST00000361125 ZNF146Q15072 292 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 RTBDNQ9BSG5 229 aaPredicted RBP17.85■□□□□ 0.45
SMURF1-201ENST00000361125 DCTN5Q9BTE1 182 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 MOSP00540 346 aa17.85■□□□□ 0.45
SMURF1-201ENST00000361125 ZNF25P17030 456 aaPredicted RBP17.85■□□□□ 0.45
SMURF1-201ENST00000361125 OR4C46A6NHA9 309 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 PRR32B1ATL7 298 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 WDR25Q64LD2 544 aaPredicted RBP17.84■□□□□ 0.45
SMURF1-201ENST00000361125 OR1P1Q8NH06 330 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 DEPPQ9NTK1 212 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 MAP1BP46821 2468 aaKnown RBP17.84■□□□□ 0.45
SMURF1-201ENST00000361125 PSG7Q13046 419 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 OR13A1Q8NGR1 328 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 NPIPB3Q92617 1050 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 TM2D1Q9BX74 207 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 IGLV3-12A0A075B6K2 115 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 CXorf65A6NEN9 183 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 A8MWL6 223 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 OR4B1Q8NGF8 309 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 S4R3C0 116 aa17.84■□□□□ 0.45
SMURF1-201ENST00000361125 RP1L1Q8IWN7 2480 aaPredicted RBP17.84■□□□□ 0.45
SMURF1-201ENST00000361125 GFI1Q99684 422 aa17.83■□□□□ 0.45
SMURF1-201ENST00000361125 PINLYPA6NC86 204 aa17.83■□□□□ 0.45
SMURF1-201ENST00000361125 CA2P00918 260 aa17.83■□□□□ 0.45
SMURF1-201ENST00000361125 MAS1LP35410 378 aa17.83■□□□□ 0.45
SMURF1-201ENST00000361125 ZNF385CQ66K41 422 aaPredicted RBP17.83■□□□□ 0.45
SMURF1-201ENST00000361125 NPIPB11E5RHQ5 1161 aa17.83■□□□□ 0.44
SMURF1-201ENST00000361125 C8orf88P0DMB2 117 aa17.83■□□□□ 0.44
SMURF1-201ENST00000361125 CRYBB3P26998 211 aa17.83■□□□□ 0.44
SMURF1-201ENST00000361125 RAXQ9Y2V3 346 aa17.83■□□□□ 0.44
SMURF1-201ENST00000361125 BTF3P20290 206 aaKnown RBP17.83■□□□□ 0.44
SMURF1-201ENST00000361125 CDX1P47902 265 aaPredicted RBP17.83■□□□□ 0.44
SMURF1-201ENST00000361125 SSBP3Q9BWW4 388 aaPredicted RBP17.83■□□□□ 0.44
SMURF1-201ENST00000361125 STPG3Q8N7X2 389 aa17.82■□□□□ 0.44
SMURF1-201ENST00000361125 TRAV30A0A087WSZ9 112 aa17.82■□□□□ 0.44
SMURF1-201ENST00000361125 PQLC2LA1A4F0 135 aa17.82■□□□□ 0.44
SMURF1-201ENST00000361125 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
SMURF1-201ENST00000361125 CFHR1Q03591 330 aa17.82■□□□□ 0.44
SMURF1-201ENST00000361125 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.82■□□□□ 0.44
SMURF1-201ENST00000361125 PSG9Q00887 426 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 C1orf162Q8NEQ5 155 aaPredicted RBP17.81■□□□□ 0.44
SMURF1-201ENST00000361125 A0A1B0GTI1 187 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 FOXH1O75593 365 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 PRB3Q04118 309 aaPredicted RBP17.81■□□□□ 0.44
SMURF1-201ENST00000361125 FAM106AQ4KMX7 169 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 NABP2Q9BQ15 211 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 GPR61Q9BZJ8 451 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 TMEM177Q53S58 311 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 FOXD3Q9UJU5 478 aaPredicted RBP17.81■□□□□ 0.44
SMURF1-201ENST00000361125 C5orf52A6NGY3 159 aa17.81■□□□□ 0.44
SMURF1-201ENST00000361125 DIRC3C9JPN6 131 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 SRSF9Q13242 221 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMURF1-201ENST00000361125 LY6G6FQ5SQ64 297 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 SLC25A33Q9BSK2 321 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 REPIN1Q9BWE0 567 aaKnown RBP17.8■□□□□ 0.44
SMURF1-201ENST00000361125 IGHV3OR16-13A0A075B7E8 117 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 LOC102723996A0A087X1L8 192 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 IGHV3-74A0A0B4J1X5 117 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 C17orf98A8MV24 154 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 EFEMP2O95967 443 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 EEF1AKMT3Q96AZ1 226 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 MRPS18CQ9Y3D5 142 aaKnown RBP17.8■□□□□ 0.44
SMURF1-201ENST00000361125 GCGP01275 180 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 TFF1P04155 84 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 TMEM30BQ3MIR4 351 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 ABLIM2Q6H8Q1 611 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 CENPVQ7Z7K6 275 aaPredicted RBP17.8■□□□□ 0.44
SMURF1-201ENST00000361125 OR51G1Q8NGK1 321 aa17.8■□□□□ 0.44
SMURF1-201ENST00000361125 ZFP36L1Q07352 338 aaKnown RBP17.8■□□□□ 0.44
SMURF1-201ENST00000361125 IGHV3-66A0A0C4DH42 116 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 RELBQ01201 579 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 SLC25A28Q96A46 364 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 TRGC1P0CF51 173 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 RRN3P1Q2M238 152 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 DNM1P46Q6ZS02 220 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 LYZL4Q96KX0 146 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 FBXL15Q9H469 300 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 CKS2P33552 79 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 DLX1P56177 255 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 CX3CL1P78423 397 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 LBHQ53QV2 105 aaPredicted RBP17.79■□□□□ 0.44
SMURF1-201ENST00000361125 SPRR3Q9UBC9 169 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 TRPM7Q96QT4 1865 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 IFITM10A6NMD0 228 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 AREGP15514 252 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 NRN1LQ496H8 165 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 SYT8Q8NBV8 401 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 DUX5Q96PT3 197 aa17.79■□□□□ 0.44
SMURF1-201ENST00000361125 IL4P05112 153 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 HSPB9Q9BQS6 159 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 RRHO14718 337 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 IGKV1D-33P01593 117 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 IGKV1-33P01594 117 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 ELOVL1Q9BW60 279 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 NMUP48645 174 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 LINC00305Q7Z4B0 112 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 CABIN1Q9Y6J0 2220 aa17.78■□□□□ 0.44
SMURF1-201ENST00000361125 SRSF12Q8WXF0 261 aaKnown RBP17.78■□□□□ 0.44
SMURF1-201ENST00000361125 GGACTQ9BVM4 153 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms