RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 FOXI3A8MTJ6 420 aaPredicted RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LDLRAD4O15165 306 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 TMEM91Q6ZNR0 172 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 TMEM86BQ8N661 226 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 SMIM8Q96KF7 97 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF831Q5JPB2 1677 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 H3BUT2 72 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 APOHP02749 345 aaPredicted RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 LINC00305Q7Z4B0 112 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 APOBEC4Q8WW27 367 aaKnown RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 ZNF729A6NN14 1252 aaPredicted RBP8.01□□□□□ -1.13
VPS13A-203ENST00000360280 VSIG10L2P0DP72 767 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 NPPCP23582 126 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 WDYHV1Q96HA8 205 aa8.01□□□□□ -1.13
VPS13A-203ENST00000360280 HYAL3O43820 417 aaPredicted RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 LIFP15018 202 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GAGE13Q4V321 117 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 PRDM13Q9H4Q3 707 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GPR183P32249 361 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GUSBP11Q6P575 273 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 MS4A4AQ96JQ5 239 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 PTPRDP23468 1912 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 PTGDSP41222 190 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 SLC25A53Q5H9E4 307 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 LDLRAD2Q5SZI1 272 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 NABP2Q9BQ15 211 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 RND2P52198 227 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 OVOL2Q9BRP0 275 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 CCL27Q9Y4X3 112 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 KIAA0040Q15053 153 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 A0A1W2PP11 408 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 PEX7O00628 323 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 HOXA3O43365 443 aaPredicted RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 GAGE2BQ13066 116 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GAGE2EQ4V326 116 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 WDR82Q6UXN9 313 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 MRPS18BQ9Y676 258 aaKnown RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 AGFG2O95081 481 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 SNRPCP09234 159 aaKnown RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 MPV17P39210 176 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 ATXN8Q156A1 80 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 PRSS41Q7RTY9 318 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 LURAP1LQ8IV03 231 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 IGHV1OR21-1A0A087WYE8 117 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 FBLN7Q53RD9 439 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 MBD1Q9UIS9 605 aaPredicted RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 C16orf97H3BN30 126 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 FOXC1Q12948 553 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 SELENOHQ8IZQ5 122 aaKnown RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 SDF2L1Q9HCN8 221 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 SPTBN1Q01082 2364 aaKnown RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 TGFAP01135 160 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 IFI27P40305 119 aaPredicted RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 RIPPLY2Q5TAB7 128 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 OR10J3Q5JRS4 329 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 HCP5Q6MZN7 132 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 GATAD1Q8WUU5 269 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 AQP3Q92482 292 aa8□□□□□ -1.13
VPS13A-203ENST00000360280 RNASEH2CQ8TDP1 164 aaKnown RBP8□□□□□ -1.13
VPS13A-203ENST00000360280 A0A1W2PPC1 479 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 NDUFA3O95167 84 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 THADAQ6YHU6 1953 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 M0R381 172 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 P2RY6Q15077 328 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 C2orf68Q2NKX9 166 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 FAM27BQ5VT28 67 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 APCDD1LQ8NCL9 501 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 PAX1P15863 534 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 TMEM196Q5HYL7 178 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 BRCA1P38398 1863 aaKnown RBP7.99□□□□□ -1.13
VPS13A-203ENST00000360280 SFTPCP11686 197 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 IRF3Q14653 427 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 FGFRL1Q8N441 504 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 CALYQ9NYX4 217 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 SEC11AP67812 179 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 ASCL4Q6XD76 172 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 TRAV24A0A0B4J272 114 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 H2BFSP57053 126 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 UNQ5815/PRO19632Q6UWF5 114 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 NHP2Q9NX24 153 aaKnown RBP7.99□□□□□ -1.13
VPS13A-203ENST00000360280 GPR132Q9UNW8 380 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 FNDC4Q9H6D8 234 aaPredicted RBP7.99□□□□□ -1.13
VPS13A-203ENST00000360280 TOMM7Q9P0U1 55 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 PIMREGQ9BSJ6 248 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 GPR6P46095 362 aaPredicted RBP7.99□□□□□ -1.13
VPS13A-203ENST00000360280 UCP3P55916 312 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 PRSS53Q2L4Q9 553 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 CASP8AP2Q9UKL3 1982 aa7.99□□□□□ -1.13
VPS13A-203ENST00000360280 A0A1W2PPE3 182 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 TMEM229AB2RXF0 380 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 UNC119Q13432 240 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 CEP250Q9BV73 2442 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 UBR3Q6ZT12 1888 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 OR2H2O95918 312 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 TDGF1P13385 188 aa7.98□□□□□ -1.13
VPS13A-203ENST00000360280 CTGFP29279 349 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms