RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CRYBB3P26998 211 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 NUTF2P61970 127 aaKnown RBP5.51□□□□□ -1.53
CSDE1-203ENST00000358528 RHOBP62745 196 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 TRA2AQ13595 282 aaKnown RBP eCLIP5.51□□□□□ -1.53
CSDE1-203ENST00000358528 RNF151Q2KHN1 245 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 DCAF10Q5QP82 559 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 ASPHD1Q5U4P2 390 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM14EPQ6UXP3 125 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 PQLC2Q6ZP29 291 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 SSBP3Q9BWW4 388 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-203ENST00000358528 WNT10AQ9GZT5 417 aa5.51□□□□□ -1.53
CSDE1-203ENST00000358528 LINC00473A8K010 186 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 TNFSF15O95150 251 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 CXorf1O96002 111 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 CGAP01215 116 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 OR5G3P0C626 314 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 HNRNPA3P51991 378 aaKnown RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 GFRA1P56159 465 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 ZNF718Q3SXZ3 478 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 FAM201AQ5SY85 155 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 ZNF295-AS1Q8N0V1 137 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 FAM19A2Q8N3H0 131 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 GBGT1Q8N5D6 347 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 KLF14Q8TD94 323 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 RND1Q92730 232 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 STARD4Q96DR4 205 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 HSPB7Q9UBY9 170 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 PLCE1Q9P212 2302 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 FRYQ5TBA9 3013 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 HELTA6NFD8 242 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 RAB29O14966 203 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 NUPR1O60356 82 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 LMO1P25800 156 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 ZNF83P51522 516 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 SPATA31B1PQ5VZV4 182 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 Q6P435 159 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 COLCA1Q6ZS62 124 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 ZNRF1Q8ND25 227 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 C2orf88Q9BSF0 95 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 PPIAL4AQ9Y536 164 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 CACNA1HO95180 2353 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 HSBP1O75506 76 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 APELAP0DMC3 54 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 IRF2P14316 349 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 NPY1RP25929 384 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 TNFSF10P50591 281 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 RANP62826 216 aaKnown RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 LBHQ53QV2 105 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 DMRTA1Q5VZB9 504 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 RNASEKQ6P5S7 137 aaKnown RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 MMD2Q8IY49 270 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 ZCCHC14Q8WYQ9 949 aaKnown RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 MRPL37Q9BZE1 423 aaKnown RBP5.5□□□□□ -1.53
CSDE1-203ENST00000358528 SH2D2AQ9NP31 389 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 PRDM6Q9NQX0 595 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 TIMM9Q9Y5J7 89 aa5.5□□□□□ -1.53
CSDE1-203ENST00000358528 TRAV3A0A0B4J244 114 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 M0R1B8 84 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 PLAUP00749 431 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 SP1P08047 785 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 MYOD1P15172 320 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 ZNF766Q5HY98 468 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 ACTL10Q5JWF8 245 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TEPPQ6URK8 271 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 ERASQ7Z444 233 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 WDR86Q86TI4 376 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 C11orf42Q8N5U0 333 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM45BQ96B21 275 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM68Q96MH6 324 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 LINC00470Q9BZP3 86 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 RNASE7Q9H1E1 156 aaKnown RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 KCNIP2Q9NS61 270 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 POLR3KQ9Y2Y1 108 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 INTS1Q8N201 2190 aaKnown RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 RBFOX2O43251 390 aaKnown RBP eCLIP5.49□□□□□ -1.533e-6■■■■□ 22.3
CSDE1-203ENST00000358528 SMPD2O60906 423 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 FOXH1O75593 365 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 VENTXO95231 258 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 PRB4P10163 310 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 COX5BP10606 129 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 COL8A2P25067 703 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 SRIP30626 198 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 PRDX2P32119 198 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 SOX8P57073 446 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 Q6ZS49 121 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 MOGAT3Q86VF5 341 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 CXXC4Q9H2H0 198 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TMEM140Q9NV12 185 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 SH3BGRL2Q9UJC5 107 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TCF19Q9Y242 345 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 SPTBN1Q01082 2364 aaKnown RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 WNK2Q9Y3S1 2297 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 ENSAO43768 121 aaKnown RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 IL18BPO95998 194 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 CA1P00915 261 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-203ENST00000358528 IGFBP2P18065 325 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 NPPCP23582 126 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 GCHFRP30047 84 aa5.49□□□□□ -1.53
CSDE1-203ENST00000358528 TIMP3P35625 211 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms