RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 P2RY6Q15077 328 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 C6orf226Q5I0X4 101 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 LINC00518Q8N0U6 118 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 LMO3Q8TAP4 145 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 FAM57AQ8TBR7 257 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 MZB1Q8WU39 189 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 COX11Q9Y6N1 276 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 IFNL4K9M1U5 179 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 GALP22466 123 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 FAM3BP58499 235 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 FGF12P61328 243 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF329Q86UD4 541 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 RFLNBQ8N5W9 214 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 WNT2BQ93097 391 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 AICDAQ9GZX7 198 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 MS4A6AQ9H2W1 248 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ST20Q9HBF5 79 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NINQ8N4C6 2090 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 TCRBV3S1A0A5B6 114 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ANKRD39Q53RE8 183 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 RPL39P5Q59GN2 51 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 TPTE2P1Q5T6R2 138 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 RNF182Q8N6D2 247 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 LINC00614P0C842 121 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 TAL2Q16559 108 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 THBDP07204 575 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 AANATQ16613 207 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ZCCHC24Q8N2G6 241 aaKnown RBP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 GPR146Q96CH1 333 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 NRIP2Q9BQI9 281 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 DNAJC4Q9NNZ3 241 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ST6GALNAC2Q9UJ37 374 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ELF5Q9UKW6 265 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 MYH2Q9UKX2 1941 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 OR11H12B2RN74 326 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 TMEM50AO95807 157 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ARL14EPLP0DKL9 152 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 UCP1P25874 307 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 EWSR1Q01844 656 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ATG4DQ86TL0 474 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 OR11H1Q8NG94 326 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 OR11H2Q8NH07 326 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 KLF14Q8TD94 323 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 KLK13Q9UKR3 277 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 CRYBB3P26998 211 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 GLIPR1P48060 266 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 PSG4Q00888 419 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 TNFRSF9Q07011 255 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ST6GALNAC6Q969X2 333 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 ABHD1Q96SE0 405 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 CYB5R1Q9UHQ9 305 aa4.94□□□□□ -1.62
BRCA1-203ENST00000357654 FOXD3Q9UJU5 478 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-203ENST00000357654 MYH7P12883 1935 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 IGKV2D-24A0A075B6R9 120 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 A0A0B4J2E0 115 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 A0A1B0GX12 115 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SCTP09683 121 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 PAX1P15863 534 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 FOXA3P55318 350 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ZP1P60852 638 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TMEM155Q4W5P6 130 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 FAM219BQ5XKK7 198 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 PET117Q6UWS5 81 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SYS1Q8N2H4 156 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 NUBPLQ8TB37 319 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 GGTLC1Q9BX51 225 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 DMRT1Q9Y5R6 373 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 PLCH1Q4KWH8 1693 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV13-1A0A0B4J241 112 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ITGBL1O95965 494 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 HLA-DRB1P01911 266 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 CTGFP29279 349 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ID3Q02535 119 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 RPL18AQ02543 176 aaKnown RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ZIC4Q8N9L1 334 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 MARS2Q96GW9 593 aaKnown RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 LINC00477Q96M19 166 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SLC17A5Q9NRA2 495 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ASB1Q9Y576 335 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 PKD1L3Q7Z443 1732 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TCHHQ07283 1943 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 A0A1B0GWB2 263 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 CTAG2O75638 210 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ESDP10768 282 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 CSRP2Q16527 193 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SPACA3Q8IXA5 215 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 SMIM2Q9BVW6 85 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 COL14A1Q05707 1796 aaKnown RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 UBR2Q8IWV8 1755 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV8-4A0A0B4J246 113 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ZAR1LA6NP61 321 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 NCR2O95944 276 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 WNT2P09544 360 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 GCAP28676 217 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 TBR1Q16650 682 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 CLPPQ16740 277 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 C8orf82Q6P1X6 216 aaPredicted RBP4.93□□□□□ -1.62
BRCA1-203ENST00000357654 UQCC3Q6UW78 93 aa4.93□□□□□ -1.62
BRCA1-203ENST00000357654 ACP7Q6ZNF0 438 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms