RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OR8H1Q8NGG4 311 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 KIAA1456Q9P272 454 aa20.15■□□□□ 0.82
SSBP3-202ENST00000357475 C7orf66A4D0T2 115 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 KBTBD11O94819 623 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 OR2A4O95047 310 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 IL6RP08887 468 aaPredicted RBP20.14■□□□□ 0.81
SSBP3-202ENST00000357475 HOXB5P09067 269 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 PLGLAQ15195 96 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 C2orf68Q2NKX9 166 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 Q6ZRM9 215 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 C16orf82Q7Z2V1 217 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 IL22RA2Q969J5 263 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 OR2A7Q96R45 310 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 C1RLQ9NZP8 487 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 JMJD1CQ15652 2540 aa20.14■□□□□ 0.81
SSBP3-202ENST00000357475 SRPXP78539 464 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 SSBP2P81877 361 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-202ENST00000357475 LURAP1LQ8IV03 231 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 C12orf45Q8N5I9 185 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-202ENST00000357475 TEX45Q8NA69 505 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 COQ8AQ8NI60 647 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 GPR146Q96CH1 333 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 PHB2Q99623 299 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 HSPB9Q9BQS6 159 aa20.13■□□□□ 0.81
SSBP3-202ENST00000357475 ZNF430Q9H8G1 570 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-202ENST00000357475 GPN1Q9HCN4 374 aaPredicted RBP20.13■□□□□ 0.81
SSBP3-202ENST00000357475 A0A0B4J2A0 478 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 DBX1A6NMT0 343 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 MPTX1A8MV57 137 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 FGF16O43320 207 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 CREBL2O60519 120 aaPredicted RBP20.12■□□□□ 0.81
SSBP3-202ENST00000357475 H2BFWTQ7Z2G1 175 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 PPP1R27Q86WC6 154 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 JMJD8Q96S16 334 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 RASL11BQ9BPW5 248 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 RANBP3Q9H6Z4 567 aaPredicted RBP20.12■□□□□ 0.81
SSBP3-202ENST00000357475 BET1LQ9NYM9 111 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 SHPKQ9UHJ6 478 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 LINC01548A6NM66 108 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 SNRPGP15A8MWD9 76 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 CA2P00918 260 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 OR2B8PP59922 312 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 NMSQ5H8A3 153 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 RNASE11Q8TAA1 199 aaKnown RBP20.12■□□□□ 0.81
SSBP3-202ENST00000357475 TMEM167AQ8TBQ9 72 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 MMP24Q9Y5R2 645 aa20.12■□□□□ 0.81
SSBP3-202ENST00000357475 UPK2O00526 184 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 CCSO14618 274 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 RELBQ01201 579 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 PRSS8Q16651 343 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 C10orf55Q5SWW7 151 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 GGNBP1Q5YKI7 109 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 OR51J1Q9H342 316 aa20.11■□□□□ 0.81
SSBP3-202ENST00000357475 NDPQ00604 133 aa20.1■□□□□ 0.81
SSBP3-202ENST00000357475 PRIMA1Q86XR5 153 aa20.1■□□□□ 0.81
SSBP3-202ENST00000357475 RRNAD1Q96FB5 475 aaKnown RBP20.1■□□□□ 0.81
SSBP3-202ENST00000357475 AIFM2Q9BRQ8 373 aa20.1■□□□□ 0.81
SSBP3-202ENST00000357475 VDAC1P21796 283 aa20.09■□□□□ 0.81
SSBP3-202ENST00000357475 GNB1P62873 340 aa20.09■□□□□ 0.81
SSBP3-202ENST00000357475 C9orf152Q5JTZ5 239 aa20.09■□□□□ 0.81
SSBP3-202ENST00000357475 VSTM2AQ8TAG5 236 aa20.09■□□□□ 0.81
SSBP3-202ENST00000357475 LSM10Q969L4 123 aaKnown RBP20.09■□□□□ 0.81
SSBP3-202ENST00000357475 RAB18Q9NP72 206 aa20.09■□□□□ 0.81
SSBP3-202ENST00000357475 IGHV7-81A0A0B4J1V7 117 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 M0QZK8 103 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 HLA-DRB1P01911 266 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 OPN1MWP04001 364 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 OPN1MW2P0DN77 364 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 OPN1MW3P0DN78 364 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 ZNF702PQ9H963 129 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 CACNG5Q9UF02 275 aa20.08■□□□□ 0.81
SSBP3-202ENST00000357475 E7EUB6 86 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 ATG12O94817 140 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 CX3CL1P78423 397 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 TMEM95Q3KNT9 176 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 Q6ZNX1 250 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 OR4A5Q8NH83 315 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 QTRT1Q9BXR0 403 aaKnown RBP20.07■□□□□ 0.8
SSBP3-202ENST00000357475 FBXO7Q9Y3I1 522 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 DUXBA0A1W2PPF3 345 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 TRIM77I1YAP6 450 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 RPL8P62917 257 aaKnown RBP20.07■□□□□ 0.8
SSBP3-202ENST00000357475 TNXAQ16473 311 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 OR10C1Q96KK4 312 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 FAM103A1Q9BTL3 118 aaKnown RBP20.07■□□□□ 0.8
SSBP3-202ENST00000357475 NPFFR1Q9GZQ6 430 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 TMED3Q9Y3Q3 217 aa20.07■□□□□ 0.8
SSBP3-202ENST00000357475 C2CD3Q4AC94 2353 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 A0A1B0GW64 132 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 SSNA1O43805 119 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 NXPH3O95157 252 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 HLA-GP17693 338 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 Q6ZSV7 163 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 FAM219AQ8IW50 185 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 MMD2Q8IY49 270 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 CADM3Q8N126 398 aa20.06■□□□□ 0.8
SSBP3-202ENST00000357475 CGB1A6NKQ9 187 aa20.05■□□□□ 0.8
SSBP3-202ENST00000357475 C15orf61A6NNL5 157 aa20.05■□□□□ 0.8
SSBP3-202ENST00000357475 SIX6O95475 246 aa20.05■□□□□ 0.8
SSBP3-202ENST00000357475 OR4A16Q8NH70 328 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms