RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KIR2DL5BA0A0G2JPC4 375 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 PMS2P5A8MQ11 134 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 TIMM8AO60220 97 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 GYPAP02724 150 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 P0C879 139 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 CD99P14209 185 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 RPL15P61313 204 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 ZNF718Q3SXZ3 478 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 FBXL19-AS1Q494R0 122 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 SPANXN5Q5MJ07 72 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 KIR2DL5AQ8N109 375 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 OR5P3Q8WZ94 311 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 RPUSD4Q96CM3 377 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 ZNF488Q96MN9 340 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 HSPB7Q9UBY9 170 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 CACNA1DQ01668 2161 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 CRYBG3Q68DQ2 2970 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 UBE2L5PA0A1B0GUS4 154 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 PAX5Q02548 391 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 C1orf194Q5T5A4 169 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 Q6P435 159 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 PKIBQ9C010 78 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 FUT9Q9Y231 359 aa10.53□□□□□ -0.72
RTFDC1-202ENST00000357348 A0A1W2PPQ1 181 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 C19orf84I3L1E1 186 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 PLAUP00749 431 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 OR4A8P0C604 315 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 RAC2P15153 192 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 ERVFC1-1P60608 527 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TNFRSF9Q07011 255 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 USF2Q15853 346 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 VWC2Q2TAL6 325 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM144Q7Z5S9 345 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM147Q9BVK8 224 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 SNHG12Q9BXW3 62 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 A0A1B0GWJ7 208 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 J3QW42 95 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMPRSS2O15393 492 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TUBG1P23258 451 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 CNN1P51911 297 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 GNB2P62879 340 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 ZNF573Q86YE8 665 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 FAM58AQ8N1B3 248 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM37Q8WXS4 190 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
RTFDC1-202ENST00000357348 OR5B21A6NL26 309 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 TMEM210A6NLX4 147 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 SIAH2O43255 324 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 NPPCP23582 126 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 GLRXP35754 106 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 GNG3P63215 75 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 FGFRL1Q8N441 504 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 OR10G9Q8NGN4 311 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 OR10G7Q8NGN6 311 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 OR4F5Q8NH21 305 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 RDH5Q92781 318 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 OR4F4Q96R69 305 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 SLC25A22Q9H936 323 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 NGBQ9NPG2 151 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 MPC1Q9Y5U8 109 aa10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 UBR5O95071 2799 aaPredicted RBP10.51□□□□□ -0.73
RTFDC1-202ENST00000357348 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 HS3ST1O14792 307 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 RAB4AP20338 218 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 HOXA4Q00056 320 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 C3orf36Q3SXR2 165 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 TEX38Q6PEX7 206 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 Q6ZR03 302 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 GATAD1Q8WUU5 269 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 MBNL3Q9NUK0 354 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 PPP1R3CQ9UQK1 317 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 RNF212BA8MTL3 300 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 GRPP07492 148 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 IL3RAP26951 378 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 KLF3P57682 345 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 FOXL1Q12952 345 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 EIF4EBP1Q13541 118 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 MRPL41Q8IXM3 137 aaKnown RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 ZNF808Q8N4W9 903 aaPredicted RBP10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 DRAM1Q8N682 238 aa10.5□□□□□ -0.73
RTFDC1-202ENST00000357348 LRRK2Q5S007 2527 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 M0R143 59 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 RHBDL1O75783 438 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 PRSS8Q16651 343 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 MBNL2Q5VZF2 373 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 ZCCHC24Q8N2G6 241 aaKnown RBP10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 ZBTB34Q8NCN2 500 aa10.49□□□□□ -0.73
RTFDC1-202ENST00000357348 OR2Z1Q8NG97 314 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms