RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SCGB2A2Q13296 93 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 GCSAMLQ5JQS6 135 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 SAMD13Q5VXD3 122 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 PNKDQ8N490 385 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR5A2Q8NGI9 324 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 SAP25Q8TEE9 199 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 PSMG3Q9BT73 122 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR2D2Q9H210 308 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 MRPL27Q9P0M9 148 aaKnown RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZFHX4Q86UP3 3567 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TRAV38-1A0A0B4J264 116 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGLC7A0M8Q6 106 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 DEFB108AA8MXU0 73 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 C11orf94C9JXX5 98 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 ESDP10768 282 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 EDDM3BP56851 147 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 RBPJQ06330 500 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IL11RAQ14626 422 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 SPEM1Q8N4L4 309 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TPRX1Q8N7U7 411 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR10P1Q8NGE3 313 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR5B3Q8NH48 314 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR4S2Q8NH73 311 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 DERL1Q9BUN8 251 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM234AQ9H0X4 552 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TP53TG3Q9ULZ0 132 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 MED12LQ86YW9 2145 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV2-26A0A0B4J1V2 119 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV3-43A0A0B4J1X8 118 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 A0A1B0GV72 72 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 ODAMA1E959 279 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 SH2D1BO14796 132 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 SAP30O75446 220 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 GOSR1O95249 250 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR2H2O95918 312 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGLV2-14P01704 120 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV3-43DP0DP04 118 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TGFBR3Q03167 851 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 LRRC10Q5BKY1 277 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 Q6ZS49 121 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TCF23Q7RTU1 214 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 RFESDQ8TAC1 157 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR5P3Q8WZ94 311 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 TMEM186Q96B77 213 aa6.92□□□□□ -1.3
CDC42SE1-201ENST00000357235 PRR14LQ5THK1 2151 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 TMEM250H0YL14 139 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 DNPH1O43598 174 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 NDUFB4O95168 129 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV3-13P01766 116 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV3-7P01780 117 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 COX5AP20674 150 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 LINC00310P59036 64 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 Q0VFX4 171 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 KRTAP27-1Q3LI81 207 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 LINC00696Q6ZRV3 163 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 LSM10Q969L4 123 aaKnown RBP6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 SH2D2AQ9NP31 389 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 ELOVL5Q9NYP7 299 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 CTXND1A0A1B0GTU2 59 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 M0R296 226 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF253O75346 499 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 PAX2Q02962 417 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 COLCA1Q6ZS62 124 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 Q8N976 141 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR1L1Q8NH94 360 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
CDC42SE1-201ENST00000357235 TTC28Q96AY4 2481 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 A0A1W2PPV4 95 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 LRP5LA4QPB2 252 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 C9orf172C9J069 976 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 RBFOX2O43251 390 aaKnown RBP eCLIP6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 GNG7O60262 68 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 S1PR2O95136 353 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 GPX1P07203 203 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 C1QTNF9P0C862 333 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 MAGEA5P43359 124 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 ATP5G3P48201 142 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 NINJ1Q92982 152 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 RNF114Q9Y508 228 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 LOC400499M0QZD8 3231 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 NCOR1O75376 2440 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 DPRXA6NFQ7 191 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 MT-CO3P00414 261 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 LGALS7P47929 136 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 THBS3P49746 956 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 RPL30P62888 115 aaKnown RBP6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 PLGLB1Q02325 96 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 AESQ08117 197 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 LPAL2Q16609 132 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 TMEM144Q7Z5S9 345 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 SGMS2Q8NHU3 365 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 NRN1Q9NPD7 142 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 KCNIP1Q9NZI2 227 aa6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 TBL2Q9Y4P3 447 aaKnown RBP6.9□□□□□ -1.3
CDC42SE1-201ENST00000357235 GPR179Q6PRD1 2367 aa6.9□□□□□ -1.31
CDC42SE1-201ENST00000357235 OR2T8A6NH00 312 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms