RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 MRPL37Q9BZE1 423 aaKnown RBP13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 SCN8AQ9UQD0 1980 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 CCL1P22362 96 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 MST1P26927 711 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 TMEM177Q53S58 311 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 LHFPL1Q86WI0 220 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 NDUFAF3Q9BU61 184 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 SSBP3Q9BWW4 388 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 A0A0A6YYD4 124 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZNF716A6NP11 495 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 C12orf77C9JDV5 145 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 TCTAP57738 103 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 ID3Q02535 119 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZDHHC16Q969W1 377 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 REPIN1Q9BWE0 567 aaKnown RBP13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 RAB1BQ9H0U4 201 aa13.26□□□□□ -0.29
TRAPPC11-202ENST00000357207 UQCRFS1P47985 274 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 SLC25A53Q5H9E4 307 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 OR51G1Q8NGK1 321 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 PGLYRP4Q96LB8 373 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 DOPEY2Q9Y3R5 2298 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 OTX1P32242 354 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 HSPB7Q9UBY9 170 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 C16orf97H3BN30 126 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 J3QW42 95 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 SLC17A3O00476 420 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 LDLRAD4O15165 306 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 HLA-DRB1P01911 266 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 RFPL3SP0C7P2 107 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 CLDN18P56856 261 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 FAM166AQ6J272 317 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 HES7Q9BYE0 225 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 FAM90A27PA6NNH2 459 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 CDCP2Q5VXM1 449 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 IMMP2LQ96T52 175 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 IL36BQ9NZH7 164 aa13.25□□□□□ -0.29
TRAPPC11-202ENST00000357207 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 IGHV3-72A0A0B4J1Y9 119 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 TFF3Q07654 80 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 CYB5R2Q6BCY4 276 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 LEAP2Q969E1 77 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 OR8B2Q96RD0 313 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 FOXD3Q9UJU5 478 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 CACNA1GO43497 2377 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 SGK494Q96LW2 274 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 C1QTNF5Q9BXJ0 243 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 WFDC1Q9HC57 220 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 DCAF16Q9NXF7 216 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 TMEM189A5PLL7 270 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 CTSSP25774 331 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 KIR2DL2P43627 348 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 COMPP49747 757 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 HERVK_113P61574 105 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 KRTCAP3Q53RY4 240 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 MUC15Q8N387 334 aa13.24□□□□□ -0.29
TRAPPC11-202ENST00000357207 C17orf98A8MV24 154 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 KLF7O75840 302 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 IL6RP08887 468 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 BMI1P35226 326 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 ATP5G3P48201 142 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 AKIRIN1Q9H9L7 192 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 EPOPA6NHQ4 379 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 PRR33A8MZF0 331 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 CKS2P33552 79 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 PSMB2P49721 201 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 IDI2-AS1Q9NZ38 188 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 AUP1Q9Y679 476 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 SLC25A17O43808 307 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 FOXJ2Q9P0K8 574 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 TMEM265A0A087WTH1 108 aa13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 TBL2Q9Y4P3 447 aaKnown RBP13.23□□□□□ -0.29
TRAPPC11-202ENST00000357207 SBF1O95248 1867 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 WNT9BO14905 357 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZNF146Q15072 292 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 NPIPB3Q92617 1050 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 OPN3Q9H1Y3 402 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 JOSD1Q15040 202 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 FADS6Q8N9I5 356 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 MRPL32Q9BYC8 188 aaKnown RBP13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 KIAA2026Q5HYC2 2103 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 SPANXN1Q5VSR9 72 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 ZNF788Q6ZQV5 615 aa13.22□□□□□ -0.29
TRAPPC11-202ENST00000357207 CGAP01215 116 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 STAG3L2P0CL84 134 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 FABP2P12104 132 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 SRSF12Q8WXF0 261 aaKnown RBP13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
TRAPPC11-202ENST00000357207 BRWD3Q6RI45 1802 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms