RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 TMEM106BQ9NUM4 274 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 PPIAL4AQ9Y536 164 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 CHCHD2Q9Y6H1 151 aaPredicted RBP10.63□□□□□ -0.71
BDNF-202ENST00000356660 TRAV1-1A0A0B4J248 108 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 RHBDL1O75783 438 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 FXYD3Q14802 87 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 MIC13Q5XKP0 118 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 ST6GALNAC3Q8NDV1 305 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 OR4P4Q8NGL7 312 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 OR10X1Q8NGY0 326 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 RNASE8Q8TDE3 154 aaKnown RBP10.63□□□□□ -0.71
BDNF-202ENST00000356660 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
BDNF-202ENST00000356660 MAS1LP35410 378 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 GNG4P50150 75 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 GAGE1Q13065 139 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 OR2M7Q8NG81 312 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 CCL17Q92583 94 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 SLC35E1Q96K37 410 aa10.63□□□□□ -0.71
BDNF-202ENST00000356660 POLR3KQ9Y2Y1 108 aaPredicted RBP10.63□□□□□ -0.71
BDNF-202ENST00000356660 TMEM30CPA0ZSE6 113 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 FOXI3A8MTJ6 420 aaPredicted RBP10.62□□□□□ -0.71
BDNF-202ENST00000356660 GALR2O43603 387 aaPredicted RBP10.62□□□□□ -0.71
BDNF-202ENST00000356660 S1PR2O95136 353 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 CD1BP29016 333 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 CAMPP49913 170 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 AESQ08117 197 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 MMDQ15546 238 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 RPEL1Q2QD12 228 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 C1orf194Q5T5A4 169 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 LRRC29Q8WV35 223 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 DNASE2BQ8WZ79 361 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 SF3B5Q9BWJ5 86 aaKnown RBP10.62□□□□□ -0.71
BDNF-202ENST00000356660 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 CSPG4Q6UVK1 2322 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 J3QR89 54 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 ARL14EPLP0DKL9 152 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 Q56UQ5 140 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
BDNF-202ENST00000356660 OR1L1Q8NH94 360 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 COMMD5Q9GZQ3 224 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 ZFP30Q9Y2G7 519 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 WIPI2Q9Y4P8 454 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 NKX6-3A6NJ46 265 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 TMEM251Q8N6I4 163 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 TCTEX1D1Q8N7M0 179 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 NPCDR1Q9BY65 106 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 CHODLQ9H9P2 273 aa10.62□□□□□ -0.71
BDNF-202ENST00000356660 M0R296 226 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 NKX2-8O15522 239 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 CRYGSP22914 178 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 ZIC4Q8N9L1 334 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 MIEN1Q9BRT3 115 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 LRFN3Q9BTN0 628 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 BRS3P32247 399 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 MRPS11P82912 194 aaKnown RBP10.61□□□□□ -0.71
BDNF-202ENST00000356660 FAM19A2Q8N3H0 131 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 SCO2A0A1W2PP80 73 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 ODAMA1E959 279 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 OR2H2O95918 312 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 IGKV1-5P01602 117 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 CEACAM8P31997 349 aaPredicted RBP10.61□□□□□ -0.71
BDNF-202ENST00000356660 PTGDSP41222 190 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 LCN2P80188 198 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 SLC25A53Q5H9E4 307 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 GFRALQ6UXV0 394 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 LSM10Q969L4 123 aaKnown RBP10.61□□□□□ -0.71
BDNF-202ENST00000356660 QTRT1Q9BXR0 403 aaKnown RBP10.61□□□□□ -0.71
BDNF-202ENST00000356660 WDR54Q9H977 334 aa10.61□□□□□ -0.71
BDNF-202ENST00000356660 THADAQ6YHU6 1953 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 TMEM238LA0A1B0GVL6 79 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 RAMP3O60896 148 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 IGKV1D-33P01593 117 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 IGKV1-33P01594 117 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 LGALS4P56470 323 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 PSG5Q15238 335 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 SLC25A40Q8TBP6 338 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 IGHV1-45A0A0A0MS14 117 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 OTX1P32242 354 aaPredicted RBP10.6□□□□□ -0.71
BDNF-202ENST00000356660 HIST3H3Q16695 136 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 MDP1Q86V88 176 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 RNASEH2CQ8TDP1 164 aaKnown RBP10.6□□□□□ -0.71
BDNF-202ENST00000356660 OR5B21A6NL26 309 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 RPL31P62899 125 aaKnown RBP10.6□□□□□ -0.71
BDNF-202ENST00000356660 WDR73Q6P4I2 378 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 ZNF826PQ6ZT77 177 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 MOB1BQ7L9L4 216 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 VKORC1L1Q8N0U8 176 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 HSD17B10Q99714 261 aaKnown RBP10.6□□□□□ -0.71
BDNF-202ENST00000356660 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 RNF115Q9Y4L5 304 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 PXMP4Q9Y6I8 212 aa10.6□□□□□ -0.71
BDNF-202ENST00000356660 VENTXO95231 258 aa10.59□□□□□ -0.71
BDNF-202ENST00000356660 ACTL10Q5JWF8 245 aa10.59□□□□□ -0.71
BDNF-202ENST00000356660 OR5B3Q8NH48 314 aa10.59□□□□□ -0.71
BDNF-202ENST00000356660 SSC4DQ8WTU2 575 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms