RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ELOA3CA0A087WX78 387 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-201ENST00000356083 STAG3L3P0CL85 134 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 PRB4P10163 310 aaPredicted RBP14.84□□□□□ -0.03
COL27A1-201ENST00000356083 RPS11P62280 158 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL27A1-201ENST00000356083 DNM1P46Q6ZS02 220 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 LINC00305Q7Z4B0 112 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 OR51M1Q9H341 326 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 PLSCR2Q9NRY7 297 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 C7orf66A4D0T2 115 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 H3BRM9 83 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 SMIM13P0DJ93 91 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 FGF5P12034 268 aa14.84□□□□□ -0.03
COL27A1-201ENST00000356083 LRRC3BQ96PB8 259 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 AICDAQ9GZX7 198 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 TAF1LQ8IZX4 1826 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 CD7P09564 240 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 CXCL3P19876 107 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 CLDND2Q8NHS1 167 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 KCNS1Q96KK3 526 aa14.83□□□□□ -0.03
COL27A1-201ENST00000356083 IGKV1D-33P01593 117 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 IGKV1-33P01594 117 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 ZNF430Q9H8G1 570 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-201ENST00000356083 SCGB3A1Q96QR1 104 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 RIF1Q5UIP0 2472 aaKnown RBP14.83□□□□□ -0.04
COL27A1-201ENST00000356083 ITGBL1O95965 494 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-201ENST00000356083 LHX2P50458 406 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 UBE2V2Q15819 145 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 FOXA2Q9Y261 457 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-201ENST00000356083 RHOVQ96L33 236 aa14.83□□□□□ -0.04
COL27A1-201ENST00000356083 MMP16P51512 607 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 C12orf54Q6X4T0 127 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 SORL1Q92673 2214 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 SCN4AP35499 1836 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 ASPDHA6ND91 283 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 FOLR2P14207 255 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 TTC9CQ8N5M4 171 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 KCNE5Q9UJ90 142 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 SIGLEC5O15389 551 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 C12orf73Q69YU5 71 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 PRR14LQ5THK1 2151 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 NPIPB11E5RHQ5 1161 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 H7C1H1 209 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 PITX3O75364 302 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 KCNE1BA0A087WTH5 132 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 CD8AP01732 235 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 SRIP30626 198 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 CKS1BP61024 79 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 TRAV30A0A087WSZ9 112 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 INS-IGF2F8WCM5 200 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 INSP01308 110 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 SEC11BP0C7V7 166 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 TMEM74BQ9NUR3 256 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 STRCQ7RTU9 1775 aa14.82□□□□□ -0.04
COL27A1-201ENST00000356083 EGR1P18146 543 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 TSPAN7P41732 249 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 PSG4Q00888 419 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 C2orf16Q68DN1 1984 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 ZP4Q12836 540 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 C10orf35Q96D05 121 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 TRAV24A0A0B4J272 114 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 GZMBP10144 247 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 ISXQ2M1V0 245 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 HLA-DRB1P01911 266 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 PAPPA-AS1Q5QFB9 102 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 MGST3O14880 152 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 RPS20P60866 119 aaKnown RBP14.81□□□□□ -0.04
COL27A1-201ENST00000356083 TSC2P49815 1807 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 WDR81Q562E7 1941 aa14.81□□□□□ -0.04
COL27A1-201ENST00000356083 C8orf46Q8TAG6 207 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 TRBV5-4A0A0C4DH59 114 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 CRHP06850 196 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 PRDM6Q9NQX0 595 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 ST6GALNAC2Q9UJ37 374 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 DUSP15Q9H1R2 295 aaPredicted RBP14.8□□□□□ -0.04
COL27A1-201ENST00000356083 ZNRF1Q8ND25 227 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 CEACAM21Q3KPI0 293 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 LURAP1LQ8IV03 231 aa14.8□□□□□ -0.04
COL27A1-201ENST00000356083 SYNGR3O43761 229 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 TRGC2P03986 189 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 RPL35AP18077 110 aaKnown RBP14.79□□□□□ -0.04
COL27A1-201ENST00000356083 SAMD13Q5VXD3 122 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 CXCL10P02778 98 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 PAX2Q02962 417 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 NPIPB3Q92617 1050 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 GRIFINA4D1Z8 144 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 C10orf111Q8N326 155 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 LRTM2Q8N967 370 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 SDF2L1Q9HCN8 221 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 PEX7O00628 323 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 MEF2CQ06413 473 aaPredicted RBP14.79□□□□□ -0.04
COL27A1-201ENST00000356083 GATD1Q8NB37 220 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 ZNF48Q96MX3 618 aaPredicted RBP14.79□□□□□ -0.04
COL27A1-201ENST00000356083 ODAMA1E959 279 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 CD24P25063 80 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 OR10J3Q5JRS4 329 aa14.79□□□□□ -0.04
COL27A1-201ENST00000356083 CGB7P0DN87 165 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 KLK2P20151 261 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 ASIPP42127 132 aa14.78□□□□□ -0.04
COL27A1-201ENST00000356083 ZNF414Q96IQ9 312 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms