RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 TMEM54Q969K7 222 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 KCNS1Q96KK3 526 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 ZPBPQ9BS86 351 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 SDF2L1Q9HCN8 221 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 LAMTOR2Q9Y2Q5 125 aa11.96□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM265A0A087WTH1 108 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 H3BVH4 76 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 RPL36A-HNRNPH2H7BZ11 118 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 MZT1Q08AG7 82 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 UNQ5815/PRO19632Q6UWF5 114 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 QTRT1Q9BXR0 403 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 PPIAL4AQ9Y536 164 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 AUP1Q9Y679 476 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 A6NDN8 102 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 LEPROTL1O95214 131 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 ARL14EPLP0DKL9 152 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 HGFACQ04756 655 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 IBA57Q5T440 356 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 SLC25A34Q6PIV7 304 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 CLDND2Q8NHS1 167 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 IL36GQ9NZH8 169 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 CHD3Q12873 2000 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 CD40P25942 277 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 RBPJQ06330 500 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 OR1B1Q8NGR6 318 aa11.95□□□□□ -0.5
SREBF1-202ENST00000355815 MRPL37Q9BZE1 423 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 PNRC2Q9NPJ4 139 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 RALYQ9UKM9 306 aaKnown RBP11.95□□□□□ -0.5
SREBF1-202ENST00000355815 M0R296 226 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 CXorf1O96002 111 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 P01737 135 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 C1QTNF9P0C862 333 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 RNPS1Q15287 305 aaKnown RBP11.94□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM256Q8N2U0 113 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 NAA38Q9BRA0 125 aaKnown RBP11.94□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM208Q9BTX3 173 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 GNB4Q9HAV0 340 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 CORTO00230 105 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 ATP5G3P48201 142 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 SMIM21Q3B7S5 101 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 SMPD2O60906 423 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 Q0VFX4 171 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 FBXW9Q5XUX1 488 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 SFRP2Q96HF1 295 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 IGHV2-70P01814 119 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 BTF3P20290 206 aaKnown RBP11.94□□□□□ -0.5
SREBF1-202ENST00000355815 RPL23P62829 140 aaKnown RBP11.94□□□□□ -0.5
SREBF1-202ENST00000355815 OR52L2PQ8NGH6 319 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 NEU1Q99519 415 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 P2RX4Q99571 388 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 MIEN1Q9BRT3 115 aa11.94□□□□□ -0.5
SREBF1-202ENST00000355815 VPS13AQ96RL7 3174 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 CELA3BP08861 270 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 SEMA5BQ9P283 1151 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 WNT9BO14905 357 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 NPY1RP25929 384 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 NTF4P34130 210 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 RPL31P62899 125 aaKnown RBP11.93□□□□□ -0.5
SREBF1-202ENST00000355815 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 SLC25A53Q5H9E4 307 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 NABP1Q96AH0 204 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM167BQ9NRX6 74 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 hCG_38984A0A1B0GV85 526 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 RPL7P18124 248 aaKnown RBP11.93□□□□□ -0.5
SREBF1-202ENST00000355815 C12orf54Q6X4T0 127 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 NIT1Q86X76 327 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 OR5A2Q8NGI9 324 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 LRRC29Q8WV35 223 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 SARAFQ96BY9 339 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 C10orf35Q96D05 121 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 HS3ST6Q96QI5 342 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 HSPB8Q9UJY1 196 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 PROCRQ9UNN8 238 aa11.93□□□□□ -0.5
SREBF1-202ENST00000355815 A0A1B0GUS0 222 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 KLK10O43240 276 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 TSPAN7P41732 249 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 KRTCAP3Q53RY4 240 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 VKORC1L1Q8N0U8 176 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 VSIRQ9H7M9 311 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 RRHO14718 337 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 FOLR2P14207 255 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 QRFPP83859 136 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 ABHD12Q8N2K0 398 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 ZADH2Q8N4Q0 377 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 RND1Q92730 232 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 TMEM106BQ9NUM4 274 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 TRANK1O15050 2925 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 IGKV1D-13A0A0B4J2D9 117 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 C9orf172C9J069 976 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 IGKV1-13P0DP09 117 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 IL3RAP26951 378 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 FGF12P61328 243 aa11.92□□□□□ -0.5
SREBF1-202ENST00000355815 TEPPQ6URK8 271 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms