RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 LY6HO94772 140 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 IFNA5P01569 189 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 IGKV1-16P04430 117 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 PRTN3P24158 256 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 SLC38A11Q08AI6 406 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 SPANXN5Q5MJ07 72 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 OR5B3Q8NH48 314 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 VSTM2AQ8TAG5 236 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 ZDHHC16Q969W1 377 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 KPTNQ9Y664 436 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 SOX15O60248 233 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 FBXO24O75426 580 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 LGALS7P47929 136 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 SERF2P84101 59 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 PRCDQ00LT1 54 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 LHX4Q969G2 390 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 ADGRG4Q8IZF6 3080 aa13.95□□□□□ -0.18
VPS13B-201ENST00000355155 KBTBD11O94819 623 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 CRYGBP07316 175 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 CDKN1AP38936 164 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 HCP5Q6MZN7 132 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 CEBPZOSA8MTT3 80 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 H3BP45 60 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 USF1P22415 310 aaPredicted RBP13.94□□□□□ -0.18
VPS13B-201ENST00000355155 C10orf91Q5T1B1 145 aa13.94□□□□□ -0.18
VPS13B-201ENST00000355155 FLYWCH2Q96CP2 140 aaKnown RBP13.94□□□□□ -0.18
VPS13B-201ENST00000355155 YLPM1P49750 1951 aaKnown RBP13.94□□□□□ -0.18
VPS13B-201ENST00000355155 RNF224P0DH78 156 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 OR2B8PP59922 312 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 VKORC1L1Q8N0U8 176 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 TMEM217Q8N7C4 229 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 TET2Q6N021 2002 aaPredicted RBP13.93□□□□□ -0.18
VPS13B-201ENST00000355155 TRAV1-1A0A0B4J248 108 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 I3L521 148 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 SAA1P0DJI8 122 aaPredicted RBP13.93□□□□□ -0.18
VPS13B-201ENST00000355155 DLK1P80370 383 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 Q6ZRG5 221 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 HSD17B11Q8NBQ5 300 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 SCRT1Q9BWW7 348 aa13.93□□□□□ -0.18
VPS13B-201ENST00000355155 TEX45Q8NA69 505 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 OR10P1Q8NGE3 313 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 CLCC1Q96S66 551 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 OR51B2Q9Y5P1 312 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 SPTA1P02549 2419 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 VWC2LB2RUY7 222 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 NDUFS8O00217 210 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 ENSAO43768 121 aaKnown RBP13.92□□□□□ -0.18
VPS13B-201ENST00000355155 LMO4P61968 165 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 MRGPRG-AS1Q2M3A8 158 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 PVRIGQ6DKI7 326 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
VPS13B-201ENST00000355155 HRNRQ86YZ3 2850 aaPredicted RBP13.91□□□□□ -0.18
VPS13B-201ENST00000355155 BTBD17A6NE02 478 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 OOSP1A8MZH6 123 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 IFNA17P01571 189 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 CD5P06127 495 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 DIAPH2-AS1Q14236 149 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 SSX9Q7RTT3 188 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 LFNGQ8NES3 379 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 TAF15Q92804 592 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS13B-201ENST00000355155 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 TEX50A0A1B0GTY4 177 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 PDLIM4P50479 330 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 SRSF1Q07955 248 aaKnown RBP eCLIP13.91□□□□□ -0.18
VPS13B-201ENST00000355155 PMS2P11Q13670 270 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 SIRPDQ9H106 197 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 NDUFA4L2Q9NRX3 87 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 NUP50Q9UKX7 468 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
VPS13B-201ENST00000355155 IGHV1-3A0A0C4DH29 117 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 IGHV4-39P01824 125 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 MAS1LP35410 378 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 SCGB1C1Q8TD33 95 aa13.91□□□□□ -0.18
VPS13B-201ENST00000355155 LILRB2Q8N423 598 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 OR1L8Q8NGR8 309 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 MS4A7Q9GZW8 240 aaPredicted RBP13.9□□□□□ -0.18
VPS13B-201ENST00000355155 SMDT1Q9H4I9 107 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 UQCC1Q9NVA1 299 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 IGHV2-70DA0A0C4DH43 119 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 A0A1W2PPI3 338 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 NDUFS7O75251 213 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 MPDU1O75352 247 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 SNCAP37840 140 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 C2orf83Q53S99 150 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 MBD3L1Q8WWY6 194 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 LINC00052Q96N35 136 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 WDR83OSQ9Y284 106 aa13.9□□□□□ -0.18
VPS13B-201ENST00000355155 NDUFS6O75380 124 aaKnown RBP13.89□□□□□ -0.19
VPS13B-201ENST00000355155 MINOS1Q5TGZ0 78 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 TMEM182Q6ZP80 229 aaPredicted RBP13.89□□□□□ -0.19
VPS13B-201ENST00000355155 MINOS1-NBL1R4GNA1 71 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 FAM157AC9JC47 383 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 RBMXL2O75526 392 aaKnown RBP13.89□□□□□ -0.19
VPS13B-201ENST00000355155 CD1BP29016 333 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 RAB11AP62491 216 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 SPSB3Q6PJ21 355 aa13.89□□□□□ -0.19
VPS13B-201ENST00000355155 ZFP36P26651 326 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms