RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 METTL26Q96S19 204 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 C9JCJ5 164 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 HCFC1P51610 2035 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 EML5Q05BV3 1969 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 PAPPAQ13219 1627 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 CD300EQ496F6 205 aaPredicted RBP10.89□□□□□ -0.67
COL6A3-203ENST00000353578 GTSF1LQ9H1H1 148 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 CA6P23280 308 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM187Q14656 261 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 VHLLQ6RSH7 139 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 CACNG8Q8WXS5 425 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 LINC00470Q9BZP3 86 aa10.89□□□□□ -0.67
COL6A3-203ENST00000353578 MLNRO43193 412 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 GCSAMQ8N6F7 178 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM56-RWDD3S4R434 201 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 P2RY6Q15077 328 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 SFTPA2Q8IWL1 248 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 SFTPA1Q8IWL2 248 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
COL6A3-203ENST00000353578 UBR3Q6ZT12 1888 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 FGF12P61328 243 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 RPL8P62917 257 aaKnown RBP10.88□□□□□ -0.67
COL6A3-203ENST00000353578 SLC37A2Q8TED4 501 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 ZP1P60852 638 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 ICAM4Q14773 271 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 NHP2Q9NX24 153 aaKnown RBP10.88□□□□□ -0.67
COL6A3-203ENST00000353578 SLC25A20O43772 301 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM258P61165 79 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 CCL20P78556 96 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 GPR82Q96P67 336 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 CCL27Q9Y4X3 112 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 C9orf153Q5TBE3 101 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 ABHD14AQ9BUJ0 271 aa10.88□□□□□ -0.67
COL6A3-203ENST00000353578 Q5BKY6 102 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 SHISA6Q6ZSJ9 500 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 SELENOHQ8IZQ5 122 aaKnown RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 FAM222BQ8WU58 562 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 TANC2Q9HCD6 1990 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 FCGR2BP31994 310 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM160Q9NX00 188 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 LIPT2A6NK58 231 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 UBE2L6O14933 153 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 ZP4Q12836 540 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 IL23AQ9NPF7 189 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 TICRRQ7Z2Z1 1910 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 ATRAIDQ6UW56 229 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 RAMP1O60894 148 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 ZNF205O95201 554 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 APOHP02749 345 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 FBLN5Q9UBX5 448 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 AURKAIP1Q9NWT8 199 aaPredicted RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 IGHV4-34P06331 123 aa10.87□□□□□ -0.67
COL6A3-203ENST00000353578 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 MRPS18BQ9Y676 258 aaKnown RBP10.87□□□□□ -0.67
COL6A3-203ENST00000353578 GZMBP10144 247 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 RPS27P42677 84 aaKnown RBP10.86□□□□□ -0.67
COL6A3-203ENST00000353578 LCTP09848 1927 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 PLAUP00749 431 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 SRFP11831 508 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 SIGLEC14Q08ET2 396 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 VSTM2LQ96N03 204 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 LRRC61Q9BV99 259 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 SF3B6Q9Y3B4 125 aaKnown RBP10.86□□□□□ -0.67
COL6A3-203ENST00000353578 NKX2-8O15522 239 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.86□□□□□ -0.67
COL6A3-203ENST00000353578 CD27P26842 260 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 ZNF683Q8IZ20 524 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 RPRMQ9NS64 109 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 ACACAQ13085 2346 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 PPIAL4EA0A075B759 164 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 PPIAL4FP0DN26 164 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 REG4Q9BYZ8 158 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 PPIAL4AQ9Y536 164 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 HIGD1CA8MV81 97 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 C12orf49Q9H741 205 aa10.86□□□□□ -0.67
COL6A3-203ENST00000353578 DEFB133Q30KQ1 61 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 PYY3Q5JQD4 70 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 MS4A5Q9H3V2 200 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 OR4D11Q8NGI4 311 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 ZNF32P17041 273 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 CEACAM21Q3KPI0 293 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 NRSN2Q9GZP1 204 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 KLF17Q5JT82 389 aaPredicted RBP10.85□□□□□ -0.67
COL6A3-203ENST00000353578 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
COL6A3-203ENST00000353578 EFNB2P52799 333 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 DNAJC30Q96LL9 226 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 KLHDC2Q9Y2U9 406 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
COL6A3-203ENST00000353578 CACNG7P62955 275 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 NUDT8Q8WV74 236 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 Q96M66 194 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 TBC1D29Q9UFV1 150 aa10.85□□□□□ -0.67
COL6A3-203ENST00000353578 OBSL1O75147 1896 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms