RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
IFT88-202ENST00000351808 PRR31Q5SQ13 230 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 UBALD1Q8TB05 177 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 SERTAD4Q9NUC0 356 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 ZNF835Q9Y2P0 537 aa11.07□□□□□ -0.64
IFT88-202ENST00000351808 C9JCJ5 164 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 K7EP34 96 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CDIPTO14735 213 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CA1P00915 261 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 CGAP01215 116 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 APOA2P02652 100 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
IFT88-202ENST00000351808 CENPWQ5EE01 88 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 ASPHD1Q5U4P2 390 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 TMEM42Q69YG0 159 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 NABP1Q96AH0 204 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 TNFSF11O14788 317 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CA3P07451 260 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 SRFP11831 508 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 MC5RP33032 325 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 PET117Q6UWS5 81 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 ZNF837Q96EG3 531 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 PSG11Q9UQ72 335 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 IGKV3D-11A0A0A0MRZ8 115 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CXorf1O96002 111 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CXCL10P02778 98 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 EN2P19622 333 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 GNG4P50150 75 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 CKS1BP61024 79 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 ZNF776Q68DI1 518 aaPredicted RBP11.06□□□□□ -0.64
IFT88-202ENST00000351808 OR2K2Q8NGT1 345 aa11.06□□□□□ -0.64
IFT88-202ENST00000351808 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 TRAPPC2LH3BP13 241 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 G6PCP35575 357 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 HHEXQ03014 270 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 VWC2Q2TAL6 325 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 RHBDD2Q6NTF9 364 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 PERPQ96FX8 193 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 PRDM6Q9NQX0 595 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 MANSC4A6NHS7 340 aaPredicted RBP11.05□□□□□ -0.64
IFT88-202ENST00000351808 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 PATE4P0C8F1 98 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 HTR1DP28221 377 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 ZXDAP98168 799 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 PSG3Q16557 428 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 ZNF48Q96MX3 618 aaPredicted RBP11.05□□□□□ -0.64
IFT88-202ENST00000351808 LY96Q9Y6Y9 160 aa11.05□□□□□ -0.64
IFT88-202ENST00000351808 TEX48A0A1B0GUV7 120 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 HELTA6NFD8 242 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 C3orf80F5H4A9 247 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 ZNF441Q8N8Z8 693 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
IFT88-202ENST00000351808 IGHV3-20A0A0C4DH32 117 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 CRYGSP22914 178 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 CD1BP29016 333 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 HSD52Q0P140 79 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 C1orf61Q13536 156 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 MIC13Q5XKP0 118 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 RNF186Q9NXI6 227 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 WDR83OSQ9Y284 106 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 ABCA7Q8IZY2 2146 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 F5P12259 2224 aa11.04□□□□□ -0.64
IFT88-202ENST00000351808 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 SPAARA0A1B0GVQ0 90 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 H0Y8G0 127 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 RBMXL2O75526 392 aaKnown RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 RHBDL1O75783 438 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 HLA-DRB1P01911 266 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 OR10J4P0C629 311 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 GCHFRP30047 84 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 TMEM97Q5BJF2 176 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 GDF5OSQ5U4N7 250 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 SLC23A3Q6PIS1 610 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 C2orf91Q6ZV80 131 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 OR10AG1Q8NH19 301 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 SSBP3Q9BWW4 388 aaPredicted RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 MTCH1Q9NZJ7 389 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 LRRC30A6NM36 301 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 CRXO43186 299 aaPredicted RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 DHHO43323 396 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 FOXH1O75593 365 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 AGFG2O95081 481 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 FABP6P51161 128 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 ZNF816Q0VGE8 651 aaPredicted RBP11.03□□□□□ -0.64
IFT88-202ENST00000351808 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 SPATA31B1PQ5VZV4 182 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 C11orf52Q96A22 123 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 RAB37Q96AX2 223 aa11.03□□□□□ -0.64
IFT88-202ENST00000351808 URB1-AS1Q96HZ7 61 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms