RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GPR146Q96CH1 333 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 REG4Q9BYZ8 158 aa10.27□□□□□ -0.77
SMAD9-201ENST00000350148 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 QRFPP83859 136 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 FOXF2Q12947 444 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 WDR82Q6UXN9 313 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 FGFRL1Q8N441 504 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 TMEM252Q8N6L7 170 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 FUT9Q9Y231 359 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 COL4A3Q01955 1670 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 A8MXK9 166 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 J3QR06 171 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 F2RL2O00254 374 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 IGKV3-15P01624 115 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 DRAM1Q8N682 238 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF735P0CB33 412 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 RASL11BQ9BPW5 248 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 LPAR2Q9HBW0 351 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 FOXH1O75593 365 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 SOD3P08294 240 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 RIPPLY3P57055 190 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 TNFRSF9Q07011 255 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 LINC01560Q8TB33 94 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 FAM222BQ8WU58 562 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 TMEM131Q92545 1883 aa10.26□□□□□ -0.77
SMAD9-201ENST00000350148 PPIAL4CA0A0B4J2A2 164 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 KBTBD11-OT1A0A1B0GTJ5 212 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 PPIAL4GP0DN37 164 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 TPRX1Q8N7U7 411 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 RTBDNQ9BSG5 229 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-201ENST00000350148 DERL1Q9BUN8 251 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 GNB4Q9HAV0 340 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 TECRQ9NZ01 308 aaKnown RBP10.25□□□□□ -0.77
SMAD9-201ENST00000350148 A0A087WV48 116 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 ACSM6Q6P461 480 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 OR4C12Q96R67 309 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 CLEC7AQ9BXN2 247 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 TMEM56-RWDD3S4R434 201 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 PLXND1Q9Y4D7 1925 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 IFITM10A6NMD0 228 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 YPEL1O60688 119 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 PAFAH1B2P68402 229 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 HLA-DRB5Q30154 266 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 FAM78BQ5VT40 261 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 YPEL2Q96QA6 119 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 HKR1P10072 659 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
SMAD9-201ENST00000350148 FOXG1P55316 489 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-201ENST00000350148 ERVFC1-1P60608 527 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 UNQ6494/PRO21346Q6UXR6 183 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 MISP3Q96FF7 219 aa10.25□□□□□ -0.77
SMAD9-201ENST00000350148 MRPL37Q9BZE1 423 aaKnown RBP10.25□□□□□ -0.77
SMAD9-201ENST00000350148 A0A0A6YYD4 124 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 SCGB1A1P11684 91 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 HSPE1P61604 102 aaKnown RBP10.24□□□□□ -0.77
SMAD9-201ENST00000350148 WNT9BO14905 357 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 ANAPC13Q9BS18 74 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 NDFIP1Q9BT67 221 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 LOC105371242A0A075B767 164 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 SRRM5B3KS81 715 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 H0YL77 283 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 ZNHIT1O43257 154 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 TEPPQ6URK8 271 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 OR52M1Q8NGK5 317 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 TXNDC17Q9BRA2 123 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 OR5AC2Q9NZP5 309 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 RCC2Q9P258 522 aaKnown RBP10.24□□□□□ -0.77
SMAD9-201ENST00000350148 CTXND1A0A1B0GTU2 59 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 SERTM2A0A1B0GWG4 89 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 CA7P43166 264 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 OSR1Q8TAX0 266 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-201ENST00000350148 SIGMAR1Q99720 223 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 NPVFQ9HCQ7 196 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 TIMM9Q9Y5J7 89 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF253O75346 499 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 CT45A10P0DMU9 189 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 CEACAM8P31997 349 aaPredicted RBP10.24□□□□□ -0.77
SMAD9-201ENST00000350148 OR4C13Q8NGP0 309 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 ZNF524Q96C55 264 aa10.24□□□□□ -0.77
SMAD9-201ENST00000350148 CA2P00918 260 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 HTR1DP28221 377 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 LHFPL1Q86WI0 220 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 LRTM2Q8N967 370 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 OR4F17Q8NGA8 305 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 TRAV24A0A0B4J272 114 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 M0QZ24 198 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 SNCGO76070 127 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 RPL27AP46776 148 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 UQCRFS1P47985 274 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 CTAG1AP78358 180 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 SNRNP200O75643 2136 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 IGKV1-12A0A0C4DH73 117 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 A0A1B0GW15 77 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 MEX3AA1L020 520 aaKnown RBP10.23□□□□□ -0.77
SMAD9-201ENST00000350148 RBFOX3A6NFN3 312 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 IGKV1D-12P01611 117 aa10.23□□□□□ -0.77
SMAD9-201ENST00000350148 SELENOTP62341 195 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms