RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RND2P52198 227 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 EDDM3BP56851 147 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 FAM3BP58499 235 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 GNB2P62879 340 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 RELBQ01201 579 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 VWC2Q2TAL6 325 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 Q8IYB0 196 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 DEFB108BQ8NET1 73 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 OR10D4PQ8NGN7 298 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 ITLN1Q8WWA0 313 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 DDB2Q92466 427 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 FAM210BQ96KR6 192 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 RHOVQ96L33 236 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MGST2Q99735 147 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 IGKV1OR2-108A0A075B7D4 117 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 BTBD17A6NE02 478 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 TMEM210A6NLX4 147 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 SRRM5B3KS81 715 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 C1QTNF9P0C862 333 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 HNF1AP20823 631 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 GATA2P23769 480 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 CCKARP32238 428 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 VDAC2P45880 294 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MEF2BQ02080 365 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 TGFBR3Q03167 851 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 ADIRFQ15847 76 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 ARSJQ5FYB0 599 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MBNL2Q5VZF2 373 aaKnown RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 TREML4Q6UXN2 200 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MOB1BQ7L9L4 216 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 PPP1R35Q8TAP8 253 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 R3HDM4Q96D70 268 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 LOXL4Q96JB6 756 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 EAF1Q96JC9 268 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 PCGF1Q9BSM1 259 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MRPL37Q9BZE1 423 aaKnown RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 MS4A5Q9H3V2 200 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 SMDT1Q9H4I9 107 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 SEPSECSQ9HD40 501 aaKnown RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.97□□□□□ -1.61
CLCN3-201ENST00000347613 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 VAX2Q9UIW0 290 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 DMRT1Q9Y5R6 373 aa4.97□□□□□ -1.61
CLCN3-201ENST00000347613 ARHGAP32A7KAX9 2087 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 PRR33A8MZF0 331 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 GFRA3O60609 400 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 ATRXP46100 2492 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 SERF2P84101 59 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 TCF15Q12870 199 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 MIC13Q5XKP0 118 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 DPPA3Q6W0C5 159 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 BHLHA15Q7RTS1 189 aaPredicted RBP4.96□□□□□ -1.61
CLCN3-201ENST00000347613 LHFPL4Q7Z7J7 247 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 FAM216BQ8N7L0 139 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 ZNF383Q8NA42 475 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 PRSS33Q8NF86 280 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 OR4F5Q8NH21 305 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 OR4F4Q96R69 305 aa4.96□□□□□ -1.61
CLCN3-201ENST00000347613 CXorf65A6NEN9 183 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 M0R1X1 148 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 RAB29O14966 203 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SMIM6P0DI80 62 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 NKX6-1P78426 367 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 H2BFWTQ7Z2G1 175 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 MRGPRGQ86SM5 289 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SSMEM1Q8WWF3 244 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 IGFBPL1Q8WX77 278 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 LURAP1Q96LR2 239 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 KCNIP1Q9NZI2 227 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 WASF3Q9UPY6 502 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SAA2-SAA4A0A096LPE2 208 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SAA2P0DJI9 122 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 FABP4P15090 132 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 CD33P20138 364 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SSBP2P81877 361 aaPredicted RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 MRPL49Q13405 166 aaKnown RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 RBMXL3Q8N7X1 1067 aaKnown RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 ZCCHC14Q8WYQ9 949 aaKnown RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 RITA1Q96K30 269 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 SMIM7Q9BQ49 75 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 OR51M1Q9H341 326 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 GCM1Q9NP62 436 aa4.96□□□□□ -1.62
CLCN3-201ENST00000347613 YTHDF2Q9Y5A9 579 aaKnown RBP4.96□□□□□ -1.62
CLCN3-201ENST00000347613 RBMXL2O75526 392 aaKnown RBP4.95□□□□□ -1.62
CLCN3-201ENST00000347613 SNRPCP09234 159 aaKnown RBP4.95□□□□□ -1.62
CLCN3-201ENST00000347613 CHRNA7P36544 502 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 GNG10P50151 68 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 SSTP61278 116 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 HBG1P69891 147 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 HBG2P69892 147 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 HLA-DRB5Q30154 266 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 MORN5Q5VZ52 161 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 SDSLQ96GA7 329 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 CCL13Q99616 98 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 HIST1H2BLQ99880 126 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 LRFN3Q9BTN0 628 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 KBTBD11O94819 623 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 IFNA17P01571 189 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 IGHV3-48P01763 117 aa4.95□□□□□ -1.62
CLCN3-201ENST00000347613 HBE1P02100 147 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms