RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NPBWR2P48146 333 aa19.64■□□□□ 0.74
NPAS3-201ENST00000346562 SLC25A34Q6PIV7 304 aa19.64■□□□□ 0.74
NPAS3-201ENST00000346562 F12P00748 615 aaPredicted RBP19.64■□□□□ 0.73
NPAS3-201ENST00000346562 TRGC2P03986 189 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 PRSS53Q2L4Q9 553 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 HIST1H2BAQ96A08 127 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 JMJD8Q96S16 334 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 SRIP30626 198 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 IGKV1D-42A0A075B6H8 117 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 GCHFRP30047 84 aa19.64■□□□□ 0.73
NPAS3-201ENST00000346562 FOCADQ5VW36 1801 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 BSPH1Q075Z2 132 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 RPL39P5Q59GN2 51 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 C4orf51C9J302 202 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 PRELID3AQ96N28 172 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 SH3BGRL3Q9H299 93 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 TCF21O43680 179 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 ARPC1AQ92747 370 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 CTHRC1Q96CG8 243 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 FAM27E3Q08E93 113 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 SAMD13Q5VXD3 122 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 ZNRF1Q8ND25 227 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 C5orf66Q9H5L9 145 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 UQCR10Q9UDW1 63 aa19.63■□□□□ 0.73
NPAS3-201ENST00000346562 HBBP68871 147 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 GREM1O60565 184 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 CA7P43166 264 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 PLP1P60201 277 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 REC114Q7Z4M0 266 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 C1QCP02747 245 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 NPIPB9F8W1W9 429 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 NPIPB7O75200 414 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 C1QL1O75973 258 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 TEX45Q8NA69 505 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 SLC25A38Q96DW6 304 aa19.62■□□□□ 0.73
NPAS3-201ENST00000346562 H3BRM9 83 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 SFRP2Q96HF1 295 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 SIGLEC12Q96PQ1 595 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 TMEM183AQ8IXX5 376 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 GPHA2Q96T91 129 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 SEMA5BQ9P283 1151 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 IL6RP08887 468 aaPredicted RBP19.61■□□□□ 0.73
NPAS3-201ENST00000346562 CRYBA2P53672 197 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 CACNG7P62955 275 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 IFI27L2Q9H2X8 130 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 TGIF2-C20orf24A0A0A6YYL0 155 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 ZIC3O60481 467 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 EFEMP2O95967 443 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 PAX1P15863 534 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 C7orf69Q9H7B7 122 aa19.61■□□□□ 0.73
NPAS3-201ENST00000346562 IGHV3-35A0A0C4DH35 117 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 CXorf65A6NEN9 183 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 TIAF1O95411 115 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 CECR9P0C854 216 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 PRDM6Q9NQX0 595 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 IGHV3-66A0A0C4DH42 116 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 ASPHD2Q6ICH7 369 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 PLSCR2Q9NRY7 297 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 F11RQ9Y624 299 aaKnown RBP19.6■□□□□ 0.73
NPAS3-201ENST00000346562 ICAM4Q14773 271 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 RARRES2Q99969 163 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 MEF2CQ06413 473 aaPredicted RBP19.6■□□□□ 0.73
NPAS3-201ENST00000346562 GDF15Q99988 308 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 FBXL15Q9H469 300 aa19.6■□□□□ 0.73
NPAS3-201ENST00000346562 CTSBP07858 339 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 VDAC2P45880 294 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-201ENST00000346562 LINC01587Q99440 93 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 FOXA2Q9Y261 457 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-201ENST00000346562 ABHD17AQ96GS6 310 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 PSMG3Q9BT73 122 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-201ENST00000346562 GGACTQ9BVM4 153 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 CHCHD2Q9Y6H1 151 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-201ENST00000346562 TMEM14DPA8MWL7 114 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 FAM90A1Q86YD7 464 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 NPDC1Q9NQX5 325 aaPredicted RBP19.59■□□□□ 0.73
NPAS3-201ENST00000346562 IGHV3OR16-13A0A075B7E8 117 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 IGHV3-74A0A0B4J1X5 117 aa19.59■□□□□ 0.73
NPAS3-201ENST00000346562 CFAP161Q6P656 301 aa19.58■□□□□ 0.73
NPAS3-201ENST00000346562 POC1AQ8NBT0 407 aa19.58■□□□□ 0.73
NPAS3-201ENST00000346562 SDF2L1Q9HCN8 221 aa19.58■□□□□ 0.73
NPAS3-201ENST00000346562 C21orf62Q9NYP8 219 aa19.58■□□□□ 0.73
NPAS3-201ENST00000346562 ZIC4Q8N9L1 334 aa19.58■□□□□ 0.73
NPAS3-201ENST00000346562 EMP1P54849 157 aa19.58■□□□□ 0.72
NPAS3-201ENST00000346562 RND3P61587 244 aa19.58■□□□□ 0.72
NPAS3-201ENST00000346562 CENPWQ5EE01 88 aa19.58■□□□□ 0.72
NPAS3-201ENST00000346562 NRN1LQ496H8 165 aa19.58■□□□□ 0.72
NPAS3-201ENST00000346562 TRAV24A0A0B4J272 114 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 ZNF660Q6AZW8 331 aaPredicted RBP19.57■□□□□ 0.72
NPAS3-201ENST00000346562 SMCHD1A6NHR9 2005 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 IGHV2OR16-5A0A0B4J2B6 119 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 TMEM250H0YL14 139 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 H0YL77 283 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 OTX1P32242 354 aaPredicted RBP19.57■□□□□ 0.72
NPAS3-201ENST00000346562 A0A1W2PRX2 142 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 TGFAP01135 160 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 IGHV3-48P01763 117 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 RFPL3SP0C7P2 107 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 TMEM170BQ5T4T1 132 aa19.57■□□□□ 0.72
NPAS3-201ENST00000346562 FMC1Q96HJ9 113 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms